Lepeophtheirus salmonis (salmon louse): 121113793
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Entry
121113793 CDS
T08214
Name
(RefSeq) brahma-associated protein of 60 kDa-like
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121113793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121113793
03036 Chromosome and associated proteins [BR:
lsm03036
]
121113793
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121113793
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121113793
PBAF complex
121113793
GBAF(ncBAF) complex
121113793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
121113793
NCBI-ProteinID:
XP_040563589
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All DBs
Position
2:complement(38366196..38367824)
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AA seq
432 aa
AA seq
DB search
MSGSPMRGAPPPGLMMRGPSPRMPPQRMMMARPAGVGGGPQLPLRPPSKVIKKKKKIADK
VLPQRVRDLVPESQAYMDLLSFEKRLDSTIMRKRLDIQEALKRPMKLKRKLRIFISNTGY
PATEGNPPSWELRVEGRLMPEKDKPKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTSAT
QETDGFQVKRPGDKNVKCTILLLLDYQPLQFKLDQRLARLLGVHTQSRPVIIAALWQYIK
THKLQDSNEKEFINCDPFLKQIFQADRIKFAEVPQRLNPLLHPPDPIVINHIINVEDTPE
QKKTACYDIDVEVDDALKAQMNSFLVSTASQQEIQSLDSKIHETVDTIKTLKVHREFYLS
FSKDPQLFINKWLISQSRDLKTMTNVAGHPEEERHTDFYGQAWIHEAVSRYFYSKIQQKR
AELDTALGIRNP
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtctccgatgcgtggtgctcctcctccaggcctcatgatgcgaggtccttct
cctcgtatgcctcctcaacggatgatgatggctcggccagcaggagttggaggtggtcct
cagcttcccttgcgccctcccagcaaagtcatcaagaagaagaagaaaatcgcggacaaa
gtacttcctcaacgggttcgagaccttgttccagagtctcaggcatatatggaccttctc
agtttcgaaaagagactggattccacaattatgcggaagcgactggacattcaggaggct
ctgaaaagacccatgaaactcaagaggaaacttcgaatcttcatatcgaatacgggatac
ccagcaacagaagggaatcctccctcttgggaattgcgagtggaaggaagactgatgccc
gaaaaggataagcccaaaaggaagttctcctcctttttcaaatccctagtgattgagttg
gacaaggatctgtatggccccgataatcatcttgtggaatggcatcgtacttctgcaact
caggaaacagatgggtttcaagttaaaaggcctggtgacaaaaatgtcaagtgtactata
ctactcttactcgactatcagcctcttcaattcaaattagatcaacgactggcacgatta
ttgggtgtccacactcaatcccgacccgttattattgctgcgctttggcaatatattaaa
acacataaactacaagactccaatgaaaaagaattcatcaattgtgatccttttctcaaa
caaattttccaagcggatcgtattaaatttgctgaagttcctcagcgcctcaaccctctt
ctccaccctccagatccaattgtcattaatcatattattaacgtagaggatacgcctgag
cagaaaaaaacagcctgttacgatattgatgtcgaagtggacgatgcactcaaagcgcaa
atgaatagtttcttggtttccactgcctctcaacaagagatacaatctttagatagcaag
atacatgaaactgtagatacaattaagactctaaaggttcatcgagaattttacttgagt
ttctcaaaggaccctcaactctttataaacaaatggcttatcagtcagtcaagagacctt
aaaactatgacaaatgtggctggtcatccagaggaagaacgtcatacagacttttacggt
caggcctggattcatgaagcagtatcgcgatacttttatagtaaaatacaacaaaaaaga
gcggaattagacacggctctcggcataagaaacccataa
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