Lepeophtheirus salmonis (salmon louse): 121113822
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Entry
121113822 CDS
T08214
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121113822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121113822
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121113822
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
121113822
NCBI-ProteinID:
XP_040563625
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Position
2:complement(36793077..36794264)
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AA seq
357 aa
AA seq
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MTVTTSSSLLVASSGGSLSVPCSVAVVSSSSSTVGVTPSNSYSNVDREKIFVWINELSCC
ETRETALLELSKKREVVPDLAPMLWNSFGTIAALLQEIINIYPAINPPVLSAHQSNRVCN
ALALLQCVASHPDTRSAFLLAHIPLYLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQ
EVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLFYICQTYDRFSHVAMI
LGKMVIALAKEPSTRLLKHVVRCYLRLSDNQRACEALCQCLPDQLKDETFVDCLKEDKST
KHWLAQLLKNLDAMSVSGNSGGSATSGGNSTAANLSSTPVLAQARSPSLSKLPGGVL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgacgacgagctcttcgcttctggttgcaagttccgggggttctttgtccgtg
ccttgttccgttgccgtagtctctagttcttcgagcactgtaggtgtgactccttccaat
tcctacagtaatgtggatagggagaagatatttgtgtggatcaatgagttgagttgctgc
gagacgcgtgagactgctcttctggagttgagtaagaagcgggaagtggtccctgacctg
gctcccatgctttggaattcctttggaacgattgcggcgcttctgcaggaaatcattaac
atttacccggccatcaaccccccggttctctccgctcatcagtccaatcgtgtctgtaat
gcactagctctgttgcagtgtgtggcgagtcaccccgacacgcgctccgcattcttactc
gcgcacattccactctacctctatcccttcttgcacaccgtctccaagacacgtcctttc
gagtacttgaggctcacgagtctgggagtcatcggagctctcgttaagactgatgagcaa
gaagtcattaacttcttgttaaccacggaaattattcccttatgtctacggatcatggag
tctggatctgaactttccaaaactgtggctactttcatccttcaaaagattctactagat
gatactggcctcttttatatatgtcagacctatgacagattctcccatgttgctatgata
ttaggcaaaatggtcattgctctggcaaaagaaccctccacgcgcttgttaaagcatgtt
gtacgttgctatctcagattatcggacaaccaaagagcttgtgaggccttgtgtcaatgt
ctaccagatcaacttaaagacgaaacttttgttgactgcttaaaagaagacaagtctact
aaacactggttggctcaattgttaaaaaatttggatgccatgtcagtctcgggaaactct
ggcggctcagctacttctggtggtaattctactgctgcaaatctttcgtctactcctgta
ctggcccaagcacgatccccaagtctctcaaagttgccggggggagtcctctaa
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