KEGG   Lepeophtheirus salmonis (salmon louse): 121113888
Entry
121113888         CDS       T08214                                 
Name
(RefSeq) uncharacterized protein
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013  Nucleocytoplasmic transport
lsm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121113888
   03015 mRNA surveillance pathway
    121113888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsm03019]
    121113888
   03041 Spliceosome [BR:lsm03041]
    121113888
Messenger RNA biogenesis [BR:lsm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     121113888
Spliceosome [BR:lsm03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    121113888
SSDB
Motif
Pfam: PWI PRP38_assoc
Other DBs
NCBI-GeneID: 121113888
NCBI-ProteinID: XP_040563685
LinkDB
Position
2:complement(3225172..3229997)
AA seq 770 aa
MADAGFFRGTSADQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAAL
LGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNARVFMGELWTLLDSAQKNDSGI
PQEILDQKKEEIKIRQAESETAAAANAARRRSPQSRSRSRERDRRRERDSRSRRSRSRDR
RRSRSRERNRRGRSRDRSRSRDRRSHSRERGSNRFRPGNEKKWMMMLKTGVPVKKDSPKS
QSRSPSREKKRNSSDSSGEEDENGRLDIKKKADSVQSKRHYRSRKDSSTESTDRRRRRSR
SRRRSHSRDRHSRERRSRSRDKKSRERRSRSRERSRSRRRSRSRDKRSRSRDRKSRSRDR
RSRSREKRSLSRERRRRERHYWAEKERRDRDRQRRERMQREEERMQRERERRDRERRDRE
RRDREKREAERARAAATAAAEKDRRRRAAVRSRGSSSSSSSSSSSSESSEEEKAASPQEE
KRAKVDRRRPNRTKESSDGSESDHSPPRSVKKKQSSHYRNSPSPRPSHQEHHSRSKVKKS
RRSSDDESSESEDSSSVERKRHKRKESRHEEVSSRRRSEPEPKKRRLREVEDEHQSSRSG
REERRIIRRRSQSESPPPPPSRQVEHNTAPPPPAPPKRGHKESSDDSEVEEKVKQRRRRP
KSSSDEEGGGGSVKSSHKKPPSKKKKRKKETSSESEDESDEEEHTKKKKKKEKKHKKHKK
NKKHKKHKRRKEESSSEEDTEELEKKLREKALMSMKNKKKGDSDDDDSSE
NT seq 2313 nt   +upstreamnt  +downstreamnt
atggcggatgcagggttcttccgagggacaagcgcggaccaagacaatcgtttttcggac
aaagagaagaagcttcttaagcaaatgcggtttgaggagattctagcaacgaaaatcgat
ttgactaaagtgaaactggatgttctgaagccctggatcaccaagaagattgcagcactc
ttggggatggaggatgacgtggttgtggagtttatttttaatcagttggagataaagaac
ccggatcctcggaaaatgcaaatcaatctgacggggttcctgaatggaaagaatgcacgt
gttttcatgggcgaactttggactctcctcgactcagctcaaaaaaatgatagcggcatt
cctcaagagattttggaccaaaagaaggaagaaatcaagattcggcaagcagagagtgaa
acagcggctgctgctaatgctgcaagacggagatctcctcaatcgcgctcaaggtcccgc
gaaagggacaggagaagggaacgagacagtcgctccaggagatccagatccagagatagg
cgtcgtagtaggtctagagaaaggaatcgtaggggaagatctagagatcgtagtcgatca
agggatcgacgtagccattcgcgggaacgtggaagcaatcgttttcgtcctggtaacgaa
aaaaaatggatgatgatgctgaaaaccggagtaccagtaaaaaaagatagtccaaaatca
cagagtcgatcacctagtcgtgagaaaaagagaaattctagcgactctagtggcgaagaa
gatgaaaatgggcgattggatataaagaaaaaggcggactctgtccaaagtaaaaggcat
tataggagtcggaaagattcatccacagaatctacagatagaagacgacgtaggtctcgc
tccagaagaagatctcatagtcgcgatcgtcattctcgcgaaagacgatcacgctctcgt
gataagaagtcaagggaaagaagatctcggtctcgagaacgttcacgctcaaggaggcgc
tctcgatctcgagataaaagatcccgttctagggaccgcaaatcccgttccagagatagg
agatcccgttctagagaaaaaagatccttgtctagagaacgccgccgtcgtgaaagacac
tattgggcggaaaaagaaaggcgtgatagggatagacaacgtcgagaaagaatgcaaaga
gaggaagaacgaatgcaacgtgaaagggagcgacgggatcgagagagaagggatcgagaa
agaagagatcgtgaaaaacgtgaggcagagagagctagagcagctgcaacagctgccgct
gagaaagatcgtagacgccgagctgctgttcgttcaaggggttcttcttcctcttcaagc
tcatcgtcttcatcttcagaatcttctgaagaagagaaggcagcatctcctcaagaggag
aaacgtgccaaggtggatcgtagaagaccaaatagaactaaagaatcatcagacggttct
gagtctgatcattcccctccaagatcagtcaagaaaaagcaatcgtcacactatagaaat
tctccatctccaagaccttctcatcaagagcatcattctcgttcgaaggtgaagaaaagt
aggcgttcatcagacgatgaatcctctgagtccgaagactcatcttccgttgaaaggaaa
aggcataaaagaaaagaaagccgacatgaagaggtttcaagtcgtaggcgctctgaaccg
gagcctaaaaaaagacgtcttagagaagttgaagatgaacaccagagtagtcgtagcggt
agagaagaacggcgtattattcgtaggcgttctcaatctgaatctcctcctcctcctcct
tctcgacaagtggagcataatacagcacctcctccccctgctcctcctaaaagagggcat
aaagagagttcagatgattcagaagttgaggaaaaggtaaaacaaagaagacgtagacct
aaatcttcttccgatgaggaagggggtggaggatctgtgaaaagctcccacaagaaacca
cctagcaaaaagaagaagagaaagaaggaaacctcgagtgaatccgaagacgaatctgac
gaagaagaacatacaaagaaaaagaagaaaaaggaaaagaagcataagaaacataaaaag
aacaagaaacataagaagcataaaaggcgaaaagaagagagcagcagtgaagaagatact
gaagagctcgagaagaagttgcgtgaaaaggcactcatgtccatgaaaaataagaagaaa
ggtgactcggatgacgatgattcatctgaataa

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