Lepeophtheirus salmonis (salmon louse): 121113888
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Entry
121113888 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013
Nucleocytoplasmic transport
lsm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121113888
03015 mRNA surveillance pathway
121113888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121113888
03041 Spliceosome [BR:
lsm03041
]
121113888
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121113888
Spliceosome [BR:
lsm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
121113888
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
121113888
NCBI-ProteinID:
XP_040563685
LinkDB
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Position
2:complement(3225172..3229997)
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AA seq
770 aa
AA seq
DB search
MADAGFFRGTSADQDNRFSDKEKKLLKQMRFEEILATKIDLTKVKLDVLKPWITKKIAAL
LGMEDDVVVEFIFNQLEIKNPDPRKMQINLTGFLNGKNARVFMGELWTLLDSAQKNDSGI
PQEILDQKKEEIKIRQAESETAAAANAARRRSPQSRSRSRERDRRRERDSRSRRSRSRDR
RRSRSRERNRRGRSRDRSRSRDRRSHSRERGSNRFRPGNEKKWMMMLKTGVPVKKDSPKS
QSRSPSREKKRNSSDSSGEEDENGRLDIKKKADSVQSKRHYRSRKDSSTESTDRRRRRSR
SRRRSHSRDRHSRERRSRSRDKKSRERRSRSRERSRSRRRSRSRDKRSRSRDRKSRSRDR
RSRSREKRSLSRERRRRERHYWAEKERRDRDRQRRERMQREEERMQRERERRDRERRDRE
RRDREKREAERARAAATAAAEKDRRRRAAVRSRGSSSSSSSSSSSSESSEEEKAASPQEE
KRAKVDRRRPNRTKESSDGSESDHSPPRSVKKKQSSHYRNSPSPRPSHQEHHSRSKVKKS
RRSSDDESSESEDSSSVERKRHKRKESRHEEVSSRRRSEPEPKKRRLREVEDEHQSSRSG
REERRIIRRRSQSESPPPPPSRQVEHNTAPPPPAPPKRGHKESSDDSEVEEKVKQRRRRP
KSSSDEEGGGGSVKSSHKKPPSKKKKRKKETSSESEDESDEEEHTKKKKKKEKKHKKHKK
NKKHKKHKRRKEESSSEEDTEELEKKLREKALMSMKNKKKGDSDDDDSSE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagggttcttccgagggacaagcgcggaccaagacaatcgtttttcggac
aaagagaagaagcttcttaagcaaatgcggtttgaggagattctagcaacgaaaatcgat
ttgactaaagtgaaactggatgttctgaagccctggatcaccaagaagattgcagcactc
ttggggatggaggatgacgtggttgtggagtttatttttaatcagttggagataaagaac
ccggatcctcggaaaatgcaaatcaatctgacggggttcctgaatggaaagaatgcacgt
gttttcatgggcgaactttggactctcctcgactcagctcaaaaaaatgatagcggcatt
cctcaagagattttggaccaaaagaaggaagaaatcaagattcggcaagcagagagtgaa
acagcggctgctgctaatgctgcaagacggagatctcctcaatcgcgctcaaggtcccgc
gaaagggacaggagaagggaacgagacagtcgctccaggagatccagatccagagatagg
cgtcgtagtaggtctagagaaaggaatcgtaggggaagatctagagatcgtagtcgatca
agggatcgacgtagccattcgcgggaacgtggaagcaatcgttttcgtcctggtaacgaa
aaaaaatggatgatgatgctgaaaaccggagtaccagtaaaaaaagatagtccaaaatca
cagagtcgatcacctagtcgtgagaaaaagagaaattctagcgactctagtggcgaagaa
gatgaaaatgggcgattggatataaagaaaaaggcggactctgtccaaagtaaaaggcat
tataggagtcggaaagattcatccacagaatctacagatagaagacgacgtaggtctcgc
tccagaagaagatctcatagtcgcgatcgtcattctcgcgaaagacgatcacgctctcgt
gataagaagtcaagggaaagaagatctcggtctcgagaacgttcacgctcaaggaggcgc
tctcgatctcgagataaaagatcccgttctagggaccgcaaatcccgttccagagatagg
agatcccgttctagagaaaaaagatccttgtctagagaacgccgccgtcgtgaaagacac
tattgggcggaaaaagaaaggcgtgatagggatagacaacgtcgagaaagaatgcaaaga
gaggaagaacgaatgcaacgtgaaagggagcgacgggatcgagagagaagggatcgagaa
agaagagatcgtgaaaaacgtgaggcagagagagctagagcagctgcaacagctgccgct
gagaaagatcgtagacgccgagctgctgttcgttcaaggggttcttcttcctcttcaagc
tcatcgtcttcatcttcagaatcttctgaagaagagaaggcagcatctcctcaagaggag
aaacgtgccaaggtggatcgtagaagaccaaatagaactaaagaatcatcagacggttct
gagtctgatcattcccctccaagatcagtcaagaaaaagcaatcgtcacactatagaaat
tctccatctccaagaccttctcatcaagagcatcattctcgttcgaaggtgaagaaaagt
aggcgttcatcagacgatgaatcctctgagtccgaagactcatcttccgttgaaaggaaa
aggcataaaagaaaagaaagccgacatgaagaggtttcaagtcgtaggcgctctgaaccg
gagcctaaaaaaagacgtcttagagaagttgaagatgaacaccagagtagtcgtagcggt
agagaagaacggcgtattattcgtaggcgttctcaatctgaatctcctcctcctcctcct
tctcgacaagtggagcataatacagcacctcctccccctgctcctcctaaaagagggcat
aaagagagttcagatgattcagaagttgaggaaaaggtaaaacaaagaagacgtagacct
aaatcttcttccgatgaggaagggggtggaggatctgtgaaaagctcccacaagaaacca
cctagcaaaaagaagaagagaaagaaggaaacctcgagtgaatccgaagacgaatctgac
gaagaagaacatacaaagaaaaagaagaaaaaggaaaagaagcataagaaacataaaaag
aacaagaaacataagaagcataaaaggcgaaaagaagagagcagcagtgaagaagatact
gaagagctcgagaagaagttgcgtgaaaaggcactcatgtccatgaaaaataagaagaaa
ggtgactcggatgacgatgattcatctgaataa
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