Lepeophtheirus salmonis (salmon louse): 121114016
Help
Entry
121114016 CDS
T08214
Symbol
sina
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
lsm04137
Mitophagy - animal
lsm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121114016 (sina)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121114016 (sina)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121114016 (sina)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121114016 (sina)
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121114016 (sina)
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121114016 (sina)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
121114016
NCBI-ProteinID:
XP_040563756
LinkDB
All DBs
Position
3:complement(17409135..17412315)
Genome browser
AA seq
360 aa
AA seq
DB search
MASGSLAVELHSRGGGRLSSSVTCGGGLDRKIPRFHSSSSSCSSPPPSSSLCSPALGMSS
SSSSSLNNSNSPSSSGAVSAASITAMPVPPNSSSASTSNSANNNSSNINHDLASLFECPV
CFDYVLPPILQCHAGHLVCSACRPKLSCCPTCRGQLGGNIRNLAMEKVASTVMFPCKYQS
SGCGASLLHNDKLDHEETCEFRPYSCPCPGASCKWQGSLEQVMSHLMQIHKSITTLQGED
IVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQQFFAIVQLIGTRKQAESFA
YRLELNGHRRRLTWEATPRSIHEGVSLAILNSDCLVFDTSIAQLFADNGNLGINVTISMC
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagggtctctggcagttgaattgcattcaagaggcggagggaggttaagcagc
agtgtgacttgtggtggaggccttgacaggaagatccctcgtttccactcctcgtcttct
tcctgttcatcgccgccgccgtcgtcgtccttgtgctctccagccttgggaatgagctcc
tcctcttcttcttcactcaacaacagcaatagcccttcttcctcaggcgccgtgtccgct
gcctccatcacggccatgccagtgcccccaaacagctcttccgcatccacttccaactct
gccaacaataattcaagcaacatcaaccacgatttggcatccttgttcgagtgtcccgtg
tgctttgactatgtgctgcctcccatactccagtgccacgcaggacatttagtttgctca
gcatgtcgaccaaagttaagttgttgtcccacttgtcggggacaactaggaggaaatatt
cggaatctcgccatggaaaaagtggcctcaacagtcatgtttccatgcaaatatcaatcc
tcaggttgtggagcttcattacttcacaatgataaactcgaccacgaagaaacgtgtgaa
tttcgtccatattcatgtccctgcccgggagcaagttgcaaatggcaggggtcactagaa
caagtcatgtcacatttaatgcaaattcacaaatccatcactacacttcaaggcgaggat
atagtgttcctagcaacagatatcaatttacctggtgcagtggattgggtcatgatgcaa
agttgtttcggtcatcattttatgcttgtgttagaaaaacaagaaaagtttgacgggcat
cagcaatttttcgcaatcgtacaattaataggtacaagaaagcaagcagagagttttgcg
tatagattagaactaaatgggcatagacgacgccttacttgggaagctactcctagatct
attcatgaaggagtctctttagcaatattgaattctgactgtttggtttttgatacgtct
atagctcagttattcgcggacaacggaaatcttggtattaacgttaccatttctatgtgt
taa
DBGET
integrated database retrieval system
