Lepeophtheirus salmonis (salmon louse): 121114111
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Entry
121114111 CDS
T08214
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lsm00536
]
121114111
Glycosaminoglycan binding proteins [BR:
lsm00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121114111
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
NTR
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
121114111
NCBI-ProteinID:
XP_040563899
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Position
3:13254842..13260161
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AA seq
645 aa
AA seq
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MTLFVHLVINLLLLSVCVRSSLGRRFGDSKLLLPYSKKSSSSSSSSLLLLDESGSFSSSS
SSKRDPCYDDKKKRPVSCIPDFVNAAFGLPVDASSTCGGSPTEICDSDKCHTCDSSHKEN
SHPPEFLTDLHNPSNVTCWKSDLLDDSTNASLTVSLKKKFELTYISLHFCGPKPTSMIIF
KSMDHRKSWQPFQYYAEDCRTTFKKNSKVPITRANEQEALCVSSYMKTDSTRIAFSTLAD
RPSSEDFEHSPVLQDWVTATDIKIVFPPNPLVSGDVAIEESLIPSSTQVNQTSLPSRWVG
VSDLAVGGRCKCNGHASSCSIEKDGEMTCNCQHNTAGRECEKCKSFHFDRPWGRATSHSA
NECVACKCNQHARRCRFNMELYQLSGGVSGGVCLKCRHNTAGRHCHYCKEGYYRNSKRDI
SHKKACEPCNCHPVGASGKICNQTNGQCPCKDGVTGVECNRCKEGYQQSGSPIAPCIKVP
RSHHNRLSSSKSGSSAYENPARDDECATCTSTSKRVQMRRYCKMDSVYLITVSDRDRADS
KWSRFSILVEKRYKKSKKRNRNNHFRRGEETYLWVKTKHLRCRCPKIRPNTSYLILNEDP
DEDAGDKKGKRGLIISKNTLVIEWKREWRRRMKRFKKRSRKYCNQ
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgactcttttcgtacatttagtgattaacttgttattattgagtgtgtgtgtacggagc
tccctaggacgacgcttcggagactccaaactcctacttccctattccaaaaagtcatca
tcttcttcatcgagctctctactccttctcgacgaaagcggttccttcagttcctcgtct
tcttctaagagagatccttgctacgatgataaaaagaaaaggccggtctcttgtatacca
gactttgtaaatgccgcctttggactccccgtagacgctagttctacgtgtggaggatct
ccaacggaaatttgcgactccgataagtgtcatacatgtgacagctcacacaaggagaat
tctcatcctcccgagtttcttacagatctccataacccttccaacgtgacctgttggaaa
tctgatctcttggacgattccaccaatgcaagtctcaccgtttctctcaaaaagaaattt
gagctcacatatatttctctgcatttctgcggaccaaagcccacttccatgatcattttc
aaaagtatggatcatcgcaagtcctggcaaccctttcagtactatgcagaggactgtcgt
acaaccttcaaaaagaattccaaagttcctattactagagcgaatgagcaggaggcactc
tgcgttagcagctatatgaaaacagactctacgcgcatcgctttttcgacgcttgctgat
cgtcctagttctgaggattttgaacatagtcccgtgctacaggattgggttacagcaacg
gatatcaaaatagtttttcctcccaatcctttagtcagtggggatgtagcaattgaagag
tctctcattccctcttccactcaagtcaaccaaactagtcttccttcaaggtgggtgggc
gtctctgatcttgctgttggaggtcgttgtaaatgtaatggacatgcctcatcatgttcc
attgaaaaggatggagaaatgacttgcaattgtcaacacaatactgctgggagagaatgt
gagaaatgcaagtccttccattttgaccgaccctggggtcgagctacttctcattccgca
aatgagtgtgttgcctgcaagtgcaaccaacatgctcgacgatgcagattcaacatggag
ctatatcaactctctggcggagtctcaggaggtgtttgtctgaaatgtcgtcacaatact
gcaggtcgtcattgtcattattgtaaggaaggctattacagaaactctaagagggatata
tcccacaagaaagcctgtgagccctgcaattgtcatcccgtaggagcctctggaaagatt
tgtaatcaaaccaatgggcaatgtccttgtaaggatggagttacaggggtggaatgtaat
cgatgtaaggaaggctatcaacaaagtggttctcctatcgctccttgcattaaagtccct
cgttctcatcataatcgtctttcctcctctaaaagtggatcctctgcctacgagaatcct
gcaagagatgatgaatgtgcaacatgtacaagcacctcaaaaagagtacaaatgcgtcgc
tactgcaaaatggactctgtttaccttatcaccgtctctgatcgagatcgagctgactct
aaatggtctcgtttttcaatccttgtagagaaacgctacaagaaatccaagaaaagaaat
cgaaacaatcatttccgacggggagaagaaacttatttgtgggtcaaaacaaaacattta
agatgtcgatgtcctaaaattcgccccaatacttcttatctgatactaaatgaggatcca
gacgaagatgcgggagataaaaaggggaagagaggattaattattagtaaaaacactctg
gtcattgaatggaaaagggaatggcgacggcggatgaagagatttaaaaagcggtcgagg
aaatattgcaatcagtaa
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