Lepeophtheirus salmonis (salmon louse): 121114187
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Entry
121114187 CDS
T08214
Symbol
casp
Name
(RefSeq) FAS-associated factor 1 isoform X1
KO
K20703
FAS-associated factor 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAF1
UBX
ubiquitin
UBA_4
Pax7
Ubiquitin_2
Mac-1
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
121114187
NCBI-ProteinID:
XP_040563995
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Position
3:9564901..9568816
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AA seq
671 aa
AA seq
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MASREEILANFQACTGIENVELAISQLEDAGWSFVDAVNKVIPGSDPSAPPTPIDISSSP
EIISPLSSNRHSFVSLADDFVPGTSSTRLLEFDVQHGEKMIHLKVHDNESILTLKTLLHK
ETGFPACKQDLHGFRGVSHSFMSRDSTKLSELNLPKQNVLHLITPDPSPPSTSESTSSSM
AENESNGESNNFKLTIEDQTNDKVYNLNFSPTLSVLSVKLGTSNVTNIPVSKQVWTGWPE
DVNDDLSLAQLGIPQEHYLTLKRLEPKLPSTSSEGTSSTNPEPRSVSFMPEIDANMSDVD
SDEEYEDAPEMEDEYFFSNNEGSSSTSKGRICPLIPDDYGDESLAGVKFAEEFAIRYGSP
HPNFFPGNLTDAIRESCMQPAKDRKMLAVYLHHDSSVLTNVFCTQALCAESIVQFLNANF
ISFGWDLTNISNRVRATEMITREFGSVASLTVRNLDVERFPILALVYRLRGTTEIFKMIH
GKVTLDELMSELLSAHETYTAQLRIEVREDEERAERDAVKREQDLAFEMSLQADREKQAQ
REREEEERKEQELLEEALRKSEEEARLLEEREKGKKRQLIEGRLPDEPTPDSKDASRLRI
RAPDGTSLERRFNQNSSIRIVLDYLFTKGYSEEEFKVLTSFPRRDLTSIDSSKTLKELNL
YPQETLTLEEK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcgggaggagatcctcgccaactttcaagcctgcacagggattgagaatgtg
gaattggctatttcacagttggaagatgcgggatggagttttgttgacgctgtgaacaaa
gtaattccaggcagtgatccctctgctccacctactcccattgatatatcttccagtcca
gaaattatatctcctctctcctccaatagacacagcttcgtgagtctcgcagatgacttc
gttccaggtacttcctctacgcgtttattagaatttgatgttcagcacggagagaaaatg
atacatcttaaagtgcatgacaatgaaagtattctaacccttaaaacgctattgcacaaa
gagactggcttccctgcctgcaagcaggatctacatggctttagaggagtctcacattcc
tttatgtcaagggactccactaaactatccgagttaaacttaccgaaacaaaacgtcctt
catttaattactcctgatccttctcctcctagtacgtctgagtctactagcagtagtatg
gctgaaaatgagagtaatggcgagtcaaataatttcaagcttactatagaagatcaaacg
aatgacaaagtgtataatctaaacttttctcccacgctttctgtcctctccgtaaaattg
ggtacatcaaatgttacaaatattcctgtttcaaagcaagtttggactggatggccagaa
gatgtcaatgatgatctcagtttagcacaattaggcattcctcaagagcattatttgacc
cttaaaagattggaacccaaattgccatctacttcttctgaagggacttcctcaactaat
cctgagccgaggagtgtaagttttatgcctgaaatcgatgctaacatgagtgatgtagac
agtgatgaagagtatgaggatgctcctgaaatggaggatgagtatttcttttcaaataac
gaagggagcagttctaccagtaaaggtagaatctgccccttgattccagatgactatgga
gatgaaagtttagctggtgttaaatttgcggaagaattcgctattcggtatgggtctcca
catccaaactttttccctggaaatttaacagatgccattagagagtcttgtatgcagcct
gccaaagatagaaaaatgctcgcagtctatttacatcatgattcttctgttcttactaac
gtattttgtacccaggccttatgtgctgaatccatagttcaatttctcaacgcaaacttt
attagtttcggttgggatttgacaaatatctcaaatcgcgtcagggctactgaaatgatc
actcgtgaatttggaagtgttgcttctttgacagtaaggaatcttgatgttgaacgcttt
cctattttagctttagtgtatcggttaaggggaacgacagaaatttttaaaatgattcat
gggaaagtaactttggatgaactgatgtcagaattattgtctgcccatgaaacttatact
gctcaactacgaatagaggttcgggaagatgaagaacgtgctgaacgggatgcagttaaa
agggaacaagatctagcatttgaaatgtccttacaggctgatagagaaaaacaagcgcaa
agagagagggaggaagaggagcggaaagaacaagaactactagaagaagcactaagaaag
tctgaggaggaagctcgtcttcttgaagaaagggaaaaaggaaagaagcgacagttaatt
gaagggagacttccggacgaaccgactcccgactcaaaagatgcttcaagactacgaata
cgtgcccctgatggaactagcttggaaagaagattcaatcaaaattcttcaataagaatt
gttctagattacttattcacaaagggatattcggaggaggaattcaaggttctcactagc
tttccacgcagagatttaacatccattgattcgagtaaaacgttgaaagaattaaattta
tatcctcaagaaactctgactctggaagagaaatga
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