Lepeophtheirus salmonis (salmon louse): 121114233
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Entry
121114233 CDS
T08214
Symbol
Vinc
Name
(RefSeq) vinculin isoform X11
KO
K05700
vinculin
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04820
Cytoskeleton in muscle cells
lsm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121114233 (Vinc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121114233 (Vinc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121114233 (Vinc)
04147 Exosome [BR:
lsm04147
]
121114233 (Vinc)
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121114233 (Vinc)
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121114233 (Vinc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
DUF3140
I_LWEQ
Motif
Other DBs
NCBI-GeneID:
121114233
NCBI-ProteinID:
XP_040564068
LinkDB
All DBs
Position
3:8596191..8653942
Genome browser
AA seq
1033 aa
AA seq
DB search
MPVFHTKTIESILDPVAQQVSRLVIIHEEGEAGHEMPDLVRPVQAVSKAVHNLVKVGREM
VISSDDAILKQDMPQALSKVENAAHLLEDAASISQLDPLSKLARSKLIEGSRLILQGTSN
VLMVFDESEVRKIVRECKKVLDYLSVAEVIESMEDLVQFVKDLSPCLSKVTFDVEKRIED
LTHQVHRECLSKCVEQVKTLAPILICSMKIFIQILVNGGKGTDEAGENRNYLAGRMSEEV
SEIVRVLQLTTYDEDEWDSDNLTVMRKTQAAIESKIQNSRDWIRDPSSSGGGSSSSSSLG
EKSSKLILELANKIADRSLPGDAEHIRKLSGDIRSMTDSLSELRTSGEGGTLQAEILARN
IDSRLNELSTTISQAINRVEKSGIQQPAPTISGKLEQARRWLEQPGVDDRGLGQHAINLI
LDEARKIAELLPPNQRDSVRSLCIETEDDIRDLKDLCTSGYAGSSRAQNLARQIATRLDA
IKDAILSVLVERVVKDFMDVGYPLKKLTDCVQNPVGASLDRDRIFIEKSDKLSLSSDNIG
RTAKMVALGNDSGNKKLAEGLLAAASQVESLTPQLINAGRICMVYPENAAAKEHFENLRK
QYIETNDRARALCDDAVDSRDFVAKSLSAMEADARRCETCVRDSNSLGLVEEAMNIARLA
NRVFQVAHQEAENSEEPAFISTLNISAEKLQSRLQIMLQSAKALALNLTNESAIKDWRKQ
SQALLESVKGVQGAISYSDSHSLPTYPNMSGLHIKGKQKGGEARDSFVTPSYPQRAPPVL
TSPFRDQKRAHLEKKQPDFTDEELSDIFQINFNEIFGSPDAAIAQSSPYKGITLPDKGRV
KHQNFLIEKNRLKQKLRRSKSASSKHEPRHPQYARNSKEFESIPSPPTQFDDNYQLLNDE
TDSKRIKASILEKANRPVVPKSESADKLIEKFIRETEFDKTQKELSRLPPPVPPPLPSFK
SNPKKALGPSERKIISSSLPRIVEFNRSQSADGRLSHIGRGETPPCRPPIIDRALSDDNF
HGELTHEIKERTP
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttttcacacaaaaaccatcgaatccattctggaccctgtggcacaacaggtt
tccagactggttataatccatgaagaaggagaagctggacatgaaatgccggaccttgtg
cgaccggttcaagctgtttctaaagcagttcataatctcgtcaaggtgggcagagaaatg
gtaattagctcggatgatgccatccttaaacaagacatgccgcaagccttatccaaagtg
gaaaatgctgcacatctcctagaagatgccgcttccatcagtcaattggatcctctctcc
aaattagcacgctctaaattaatagagggctcacgacttatccttcaaggaacgtccaat
gttctcatggtatttgatgagtctgaagtccgtaaaattgttagggaatgtaaaaaagta
ttggattatctctctgtggctgaagtgattgagtccatggaggacttggtacaatttgtc
aaggatttgagtccgtgtctttctaaagttacatttgatgtcgaaaaacgtatagaggac
cttacacatcaagtacatcgggaatgtttgtccaaatgtgtggagcaagtcaaaacactc
gcgcctattcttatctgctccatgaaaatctttattcaaatccttgtaaacggtgggaaa
ggaacggatgaagctggagagaaccgaaactacctcgcggggcgaatgtccgaagaagtc
tcagaaattgttcgtgttcttcaactcacaacctatgacgaggatgaatgggactctgat
aatctcaccgtcatgcgtaaaacacaagccgctattgagtccaaaatacaaaactcccgt
gattggattcgggatccttcctcctcagggggtggaagtagtagttcttcttcccttgga
gagaaatcctctaaattgattcttgagttggcgaataagattgcagatcggagtttacct
ggagatgcggagcatattcggaaattgagtggggatatacgttccatgacggattctttg
agtgaattgaggacttctggagagggaggaacacttcaagccgagattttggctcgaaat
atcgattcacgacttaatgagctttctacaaccatcagtcaggcaattaatagagtggaa
aaatccgggattcaacagcccgcacccaccatcagtggcaaattagagcaggcaagaaga
tggttagaacaacccggggttgatgatcggggattgggtcaacatgctataaatttaata
ctagatgaagctcgtaagattgcagaattgttacccccaaatcaaagggacagtgtacgc
agtctttgcatagagacagaggacgacattcgggatcttaaagacttgtgcacaagtggc
tatgctggctcgtcacgggctcaaaatcttgcaaggcaaattgctacacggttagatgcc
attaaagacgctattctctccgttctggtggagagagttgttaaggatttcatggacgtg
ggctaccctcttaaaaagttaacggactgtgttcaaaatccggtgggagcctccttggat
cgtgatcgtatcttcattgaaaaatcagataaattgtctctgtcctctgataatattgga
aggactgcaaaaatggtggcgttggggaatgactctggtaataaaaaattagcagagggt
ctcttggctgcggctagtcaggttgagtcccttaccccacaactcatcaacgcaggccgg
atttgcatggtttatcctgaaaacgctgcagcaaaagaacatttcgagaatttaagaaag
cagtatattgaaacaaacgatcgtgcaagagctctttgcgatgatgctgttgatagtaga
gactttgttgcaaagtcgctttccgcgatggaggccgacgcccgtcgctgtgaaacttgc
gttcgggattccaattccttgggcctcgtggaagaagccatgaatattgctcgtttagca
aaccgcgtgtttcaagtagcccatcaagaggcggaaaattcagaagaacctgcttttatt
tccacgcttaatatctctgcggaaaagcttcaatctcgcctacaaatcatgcttcagtct
gcaaaagcccttgctcttaacttgaccaacgaatctgcaattaaggactggaggaaacaa
agtcaggcgctactagaatctgtcaaaggagtacaaggagcaatctcttactcagactca
cactccttgcctacctatccaaacatgagtggactacatattaaaggaaagcagaaagga
ggagaggcgcgggattcttttgtaaccccttcttacccacaaagagctcctcccgtactg
acatcacctttcagagaccaaaaaagagcacacttggagaagaagcagccagattttact
gatgaagagcttagtgacatatttcaaattaattttaatgagatattcggatctccggac
gctgcaatagctcaaagtagtccttataaagggataacactcccagacaagggaagagtg
aagcatcaaaactttcttatcgaaaaaaataggctgaaacagaaactgagaagatccaaa
agtgcctcgagcaagcacgaacctcgtcatcctcaatatgctcgtaattcaaaggaattt
gagagcattccatctcctcctacccaatttgatgacaattatcaactcctcaacgatgaa
acggactctaagagaattaaagcctccatacttgagaaagcaaatcgtcctgtcgtacca
aaatcagagtctgcagataaattgattgaaaaattcattcgagaaactgaatttgacaag
acccaaaaagaacttagcagactacccccacccgttccaccccctcttccatcattcaaa
tcaaatcctaaaaaagcacttggcccctccgagagaaaaatcatttcctcatccttaccc
agaatagttgagttcaaccgctctcaatccgctgatgggagattatcccatattggaaga
ggagaaacacctccttgtcgaccccctataattgatagagccctctctgatgataacttt
cacggagagctgacgcatgaaatcaaagagagaacaccatag
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