Lepeophtheirus salmonis (salmon louse): 121114241
Help
Entry
121114241 CDS
T08214
Symbol
toy
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121114241 (toy)
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121114241 (toy)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
DUF6115
HTH_SB
HTH_28
Motif
Other DBs
NCBI-GeneID:
121114241
NCBI-ProteinID:
XP_040564081
LinkDB
All DBs
Position
3:complement(8447144..8472864)
Genome browser
AA seq
565 aa
AA seq
DB search
MKDLSSQENHASLYRDHVTDPCLLGHSGVNQLGGVYVNGRPLPDSTRQKIIELAHSGARP
CDISRILQVSNGCVSKILGRYYETGTIKPRAIGGSKPRVATPGVVSKISEYKRECPSIFA
WEIRDRLLSEGVCNNDNVPSVSSINRVLRNLAATKEQSASQSLPSADSVYDKLRMFNGQA
AAAASWAWYGGTTPSGHPHLSIPPNSGPHHHGAPHHPGLSSSPHQFSSTESTEDKKSTSG
GFLGDFGSDGINEATSDGNSEHNSSADEDSQLRLRLKRKLQRNRTSFSTEQIEQLEKEFE
RTHYPDVFARERLAEKIGLPEARIQVWFSNRRAKWRREEKLRNQKREPVDANSSSSAGGA
GEMMTSLGGGENNNNNNNVGEMSAPNHNGDLSGVPNGGVGPMNEDNPHATTPDPPSTGSV
AASSMTSRLHFQSGFNSMYPSIPQPIGGSMSDPYRYEQFFPSSYSSMGSSLSGSCLQQQR
DYPYMFHHDPLSSLSSASAYGRSCGGSSSHPVSNVSHMGATGYGSSLPSASQGTAGVISS
GLSVPLQVPGQSSTDLTSNYWSRIQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttgagttcacaagaaaatcacgcatccttatatcgagatcatgtgacagac
ccttgtcttttaggccacagtggagtcaatcaactaggtggcgtttatgtcaatggaaga
cctcttccggattcaacccgtcagaagataattgaactggcacactctggtgccagacca
tgtgatatttcccgaatccttcaagtgtctaatggctgtgtatccaaaatccttggaagg
tattacgagaccggtaccattaaacctcgtgccataggaggttctaagccgcgtgttgct
acccctggggttgtgagtaaaatttctgaatataaacgagagtgtccatccatatttgca
tgggaaattcgggatcgactcctatctgaaggggtttgcaacaacgataatgtccctagt
gtgtcttcaatcaatagagttcttcgtaatttggctgcaaccaaggagcagtccgcctca
caatcccttccctctgcagatagtgtgtatgataaactaagaatgttcaatggacaagca
gccgcagctgcctcatgggcctggtatggaggcaccacccctagcgggcatcctcatttg
agtatccctcctaactctggtccacaccatcatggagctccacatcatccgggtctgagc
tcctctcctcatcaattctcttctactgagtccacagaagataaaaaatccacatcggga
ggattccttggtgattttggaagtgatggaattaacgaggctacatcagatgggaattct
gagcataattcatcagctgatgaggactcccagctccgactccgactcaaacgtaagctt
caaagaaataggacttcattctctacggaacaaatcgaacagctcgaaaaagaatttgaa
cgaacgcattatcctgatgtctttgcaagagagcgtttagccgaaaagattggacttccc
gaggcgagaattcaagtttggttttcaaaccgtcgagcaaagtggcgacgtgaagagaaa
ttaaggaatcaaaaacgtgagcccgtcgacgcaaattcttcttcgtcggcgggaggcgca
ggagaaatgatgacgtctcttggcggtggtgaaaataacaataataataacaatgtcggt
gaaatgagtgctcctaatcataatggtgatttatccggggtgccaaatggcggagttgga
cccatgaatgaggataatcctcatgctacgaccccagatcctccatccactggctctgtt
gcagcatcctccatgacctccagacttcattttcaatccggttttaactccatgtatcca
tctattccacaacccattggtggatccatgtctgatccttacaggtatgagcaattcttt
ccgtcgtcctatagttccatgggctctagtttgtctggctcatgtcttcaacagcaaaga
gactatccctacatgtttcatcacgatccactttcgtctctttcatctgcgtccgcttat
ggaagatcctgtggaggttcctcctctcatcccgtatctaatgtttcacatatgggtgcc
acaggctacggatcctcattgcccagtgcatcacagggtactgcaggagtcatttcgtca
ggtttatccgttccacttcaagtcccaggtcagtccagcacggatcttacatccaactac
tggtcacgcattcagtaa
DBGET
integrated database retrieval system
