Lepeophtheirus salmonis (salmon louse): 121114360
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Entry
121114360 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121114360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121114360
03110 Chaperones and folding catalysts [BR:
lsm03110
]
121114360
04121 Ubiquitin system [BR:
lsm04121
]
121114360
Enzymes [BR:
lsm01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
121114360
Spliceosome [BR:
lsm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
121114360
Complex C
U4/U6.U5 tri-SnRNP related factors
121114360
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
121114360
Chaperones and folding catalysts [BR:
lsm03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
121114360
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
U-box type E3
121114360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-Nse
zf-NOSIP
Iron_permease
Motif
Other DBs
NCBI-GeneID:
121114360
NCBI-ProteinID:
XP_040564243
LinkDB
All DBs
Position
3:complement(4942211..4944317)
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AA seq
513 aa
AA seq
DB search
MGKKQHQSDKLYLTATEWANFFGGKKVKRELTADEKDYRRLPLDHCSLSLQPFTNPYSDM
DGHIFDLASIVPFLKKYKLNPITGKRLEAKDLLKLHFTKNSDGHYHCPVLYKVFNNHSYV
AAIKTTGNVFSYEAIEELNIKTKNWKDLISDEPFSRSDVIIIQDPKNFEKFNLANYYHIK
HKVKVDDDDLVRAKKDPKARIKNINAETRDALQELEETYVEPIRDIKKEPKADKVNSAYY
STGKVAASFTSTAMERETVSEPAILEDDIVRYSRIKKNGYVRLITNLGNINLELNCTHIP
KACENFIKLCQKGYYNQTKFHRSIKHFMIQGGDPTGTGTGGESYWGDTFKDEFKPFLSHT
GRGVLSMANSGENTNKSQFFITFRSCKHLDKKHTIFGKVVGGMDTLSAFEKIETDNKDKP
IEDIIIQRATVFVDPYTEIDEALAAERAEESMKNSKKEEKLKKLKAPLKAYSSGVGKFIN
PSLQKEAKRXNSGGPPSKKSKNANYSFSNFSSW
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagcagcatcagagtgataagctctacttaacggctacagaatgggccaac
ttttttggagggaagaaggtcaaacgggaattgactgcggatgaaaaggattatcgtcga
ttgcccctggaccattgctccttgagtcttcagccattcacgaatccttattctgatatg
gatgggcatatttttgatttagcgtctattgtgccctttctcaaaaagtataaacttaat
cctataacggggaagagactggaggccaaggatctattgaaattacattttacaaagaat
tcggatggacactaccattgccctgttctctacaaagtctttaacaatcattcctacgtt
gcagcgattaaaaccacgggaaatgttttctcttatgaggccatcgaagagctcaacatc
aaaactaagaactggaaggatctcatttctgacgaaccgttcagtcgctcggacgtcatc
atcattcaagaccctaaaaactttgaaaaattcaatttagccaactactatcacatcaaa
cacaaagtaaaagtcgatgatgacgaccttgttagggcaaaaaaggatccaaaggctcgt
attaaaaatatcaatgctgagacgagagatgccctacaagaacttgaagagacctacgtt
gaacctattagggatattaaaaaagaaccaaaggcggataaggtcaactctgcctactat
tccactggaaaagtggctgcttcatttacctctacagccatggagagggaaaccgtgtca
gaacctgctattctcgaagatgatatcgttcgatattctcgaataaaaaaaaatggttat
gttcgacttataacaaatttagggaatattaatttagagctcaattgtacacatattcct
aaagcttgtgaaaactttatcaagttgtgtcaaaaaggatattacaatcagactaaattt
caccgctccatcaaacattttatgattcaaggaggggatcctactggaactggcactggt
ggagagtcatactggggcgatactttcaaagatgagttcaaaccttttttatcgcatact
ggacgtggtgttttaagtatggctaattctggggaaaataccaataaatctcaattcttc
attacttttagatcatgtaagcatttggacaaaaaacataccatatttggaaaagtcgtg
ggtggaatggatacactttctgcttttgagaaaattgagactgataataaggacaagccc
attgaagatattataattcaaagagcaactgtgtttgtcgatccttatactgaaattgat
gaagctctagctgctgaacgtgctgaagaatcaatgaagaactcgaagaaggaagaaaaa
ttgaagaaattaaaggctcccctaaaagcttactcgagtggggttgggaaatttatcaat
ccctctttacagaaggaggctaaaaggnccaattcaggaggcccacctagtaaaaaatca
aaaaatgcaaactattcttttagtaattttagttcgtggtga
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