Lepeophtheirus salmonis (salmon louse): 121114426
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Entry
121114426 CDS
T08214
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1
KO
K22869
WD repeat-containing protein 60
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsm03037
]
121114426
Cilium and associated proteins [BR:
lsm03037
]
Primary cilia and associated proteins
Dynein and associated proteins
121114426
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_NE0113
IL3Ra_N
Motif
Other DBs
NCBI-GeneID:
121114426
NCBI-ProteinID:
XP_071742974
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Position
3:complement(2961701..2964379)
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AA seq
768 aa
AA seq
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MIYLIIIGTKLQRTTPRITDHSKEKRKCMKKNSSKRKEVKLMLNQLGIHPNLELKSSHYQ
RVEKNTVKGDRVHESSSSKEAKPSRKSEIVTIEKSPQIQASIITKDETEIAEEIVPDKDS
LSGDIEYEDDFEDYEEDFESDDEDGDMGEEELVMIDKKMDSGNFDVTPRFLKEIAEVKNA
IMEENCATKKPKHPVPEETPHTDLTQSPDRSQTLVFNFDAAKKRKKEIDKSSKTKKRGRE
LLSMIRLDTVTIDILNIPPISYEKFMTTFGKGRQAIVQTGEDIFDKGVQCDGIESLNKWT
QFPPSTKFDADLPIQSIIKGVGGEGQKEDERETFLNSIDYTRLDTLITSGGKVILTLMQE
KESQFFDKTNNHLNQSATDFSSNIISLPISNYPYLKHIISVKFALHQPYLLITCHYDLES
KSSYLAIWDLNAPKDSPPQKLLTVRGLVTTFCIYNYKTSLIFAGLSNGIIVLWDLKEEIG
LHSKRENELASLRSPTYIDEKSHESSITEIITLLDESNSEPNSFQIVSIEEQSKLIIWTV
LEENYNKEEFLGLAYWGSIRLVPSTTLNYNEKLLFLDVCSDKDGSKLFVATDSGQILHFY
RRDAGFRRPTPSVFKSEIEGLSASCNKVIYSAFESYKLLYAGFDDGYVRVYNITNEKPIL
VWPAATQGSPLLELKLSFFRPSIFFIIDSDSNIVAWNLLNNTTSPVCSLKNTTAVSMDLN
QGQDKEYKSLMAVGLANGNVDIHTLKEEFTSNNKNEMEMFSQFIFLLL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgatttacctaatcataatcggaacaaaactacaaaggacaacaccaaggatcacagat
cactcgaaagaaaaaagaaagtgtatgaagaagaacagctcaaaaagaaaagaggtaaaa
ctaatgttaaaccaattagggattcatcccaatctagaactaaaatcaagccactaccag
agagtagaaaaaaataccgtcaagggagatagggttcacgagagtagtagtagtaaagaa
gcaaaaccctccaggaaatctgaaatagtaacaattgagaaatcccctcaaattcaggcc
tcaattattactaaagatgaaactgaaatcgcagaagaaattgttcctgataaagactca
ctgtctggtgatattgagtatgaagatgactttgaagactatgaagaggattttgaatca
gatgatgaggacggcgatatgggggaggaggaattggtgatgattgataagaaaatggac
tctggaaattttgatgtaactccaagattccttaaagaaatagctgaggtaaaaaatgca
atcatggaagaaaattgtgcgaccaaaaaacctaagcatccagtacctgaagaaactcct
catactgatttgacccagagtccagaccgttctcaaacattagtttttaattttgacgca
gcaaagaaacgaaagaaagaaatcgacaagtcctccaagaccaaaaaaagaggaagggaa
ttattgagtatgattcgcctggatacagttactatagacattttgaatatcccacccatc
agttatgaaaaatttatgaccacttttggaaaggggcgacaggctattgttcagacaggg
gaggacatctttgataaaggagttcaatgtgatggtattgagtctctcaataaatggact
caatttcctccatccaccaaatttgatgcagatcttccaattcagagtataataaaagga
gtcggaggagaaggtcaaaaagaggatgaaagagaaacatttctcaattccattgattac
acaagactggacacattaattacatctggtggaaaggttattctgactctaatgcaagaa
aaggagagtcagttcttcgataagactaataatcaccttaaccaaagtgccactgatttt
tcatctaatataatcagtttacccatttctaattacccttacctcaaacacatcatatca
gtgaaatttgctttacatcagccttatctcttgataacgtgccattatgacttagaatca
aaatcttcatatctggctatttgggatttaaatgctccaaaggattcacctcctcaaaaa
ttactcacagttagaggactagttacgacattttgcatttataattacaaaacctctcta
atattcgccggactaagtaatggcataatcgtactatgggatcttaaagaagaaattgga
ttgcattctaagagagaaaatgaattagcgtcactaagatccccgacttacatcgatgag
aaatctcatgagtcgtccatcactgaaataataacattacttgatgaatcaaattcagag
cctaattcctttcaaattgtatcaatcgaagagcaatctaaactcatcatttggactgtt
ttggaagaaaattataataaagaggaattcttaggactagcttattggggctcaatcaga
cttgtacccagcacgactcttaattataatgaaaagttactttttttggatgtttgcagt
gacaaggatggaagtaaacttttcgtggcaacagacagtgggcaaattctacacttttat
agaagagatgcaggctttagacgcccaacaccaagtgtctttaagtcagagattgaagga
ctatctgcaagttgcaataaagtaatctattcagcatttgaatcgtataaattgctttat
gcgggatttgatgatggttatgtccgagtttacaatattactaatgaaaaaccaatcctg
gtgtggccagctgcaacacaaggctctcctttgctggagctcaagctttcctttttccga
ccaagtatattttttatcatcgactctgattcgaatatagtagcttggaatttattaaac
aataccacttcaccggtttgctcgttaaaaaacactacagccgtttcaatggatcttaac
cagggtcaagacaaggagtataagtcattgatggcggtaggtttagccaatggtaacgtg
gatattcatactttaaaggaggaatttacctcaaataacaagaatgaaatggagatgttc
agtcaatttatttttttattattataa
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