Lepeophtheirus salmonis (salmon louse): 121114450
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Entry
121114450 CDS
T08214
Symbol
aub
Name
(RefSeq) piwi-like protein Siwi
KO
K02156
aubergine
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121114450 (aub)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121114450 (aub)
piRNA pathway
121114450 (aub)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoMid
ArgoL1
DUF4844
Motif
Other DBs
NCBI-GeneID:
121114450
NCBI-ProteinID:
XP_040564360
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Position
3:2689562..2693350
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AA seq
881 aa
AA seq
DB search
MSSRKPPPLPENLAGRGRGGRGGRIRPPTTLMPGPIPRSGLMEGAAPRPRPPFRQFPSLS
SSSSVPGVAGSSESAVESVTQKLGLMNTDESESIEGTGRGRCRGKLSTCMLRTRPDDCSS
KVGTSGNVVTIATNHFIMKCKSGWNLLQYHVSFNIEEDRTYMKKKYVKQVANKLPPYICD
GATLFTVTPLTHDNSPFEICTKREDDGKMIGITMKYTRQVSPMDFSYFQFFNIILRRCME
NLDLQMLDRNYYDPNAKVTLTDLHLELWPGYITSIRRHEKEVLLCCEISNKILRTDTVYS
QLRTASATGDVRNAATRLLLGEIVITRYNNKTYKIDDIDWNTTPSSTFPKRDGSSMSFSD
YYRERYNITIKDLKQPLLISLPRERDRRGGNMDKNQRIMLVPELCYMTGLSESQRSNFSL
MKSLGEYTRQDPANRCSSLKKFSQRLLSSPSVKEELKKWNIELDDKLRTFQGRSLPPEVI
LEGSGKKISYPVENADWGSTFRNMKLFQPAHCQKWVVISPHRLRNETSDFVKGLLKVSNG
MGFQLDAPKLFEIQDDRVGTYVNEINSTLCLRPPPQMIMVVVPRNTGDAYSAIKKICCVE
KPIISQVITGTLLKKPKGLMSVATKVAVQMATKLGAEPWGVSIPIKNTMVIGYDSYHDTS
LKGKSVGAVVSSINDSLTRFVSSVTIHQHNEELLNQIGMCISRALRKYNEVNNAYPKRII
IYRDGVGDGQIETVKQHEIPAIKEVLKKLNITPKFTFIIVSKRVNSRFFLKTPQRMLNPD
SGTVIDDVVTLPERYDFFLVSQSVRQGTVNPTSYNIIEDESGLKPDHIQKLTYKLTHLYY
NWPGTVRVPSVCQYAHKLAYLVGTSIHQDPDASLDSTLYYL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctagaaagccgcctcctctccctgaaaacctcgctggtcgaggaagaggcgga
cgcggtggtcgaataagaccacccacaactctcatgcctggaccaatcccacgttctgga
ttaatggagggagctgcaccgagacctcgtccaccgtttcgacaatttccatcactttca
tcaagctcttcagttcccggggtcgcaggatcttctgaatcggctgttgaatctgttact
caaaagttaggtctaatgaatacggatgagagtgagtctatcgaaggaacggggcgtgga
agatgcagagggaaactctcgacttgtatgctccgcacccgcccagatgactgctcctca
aaagtgggtacatctggaaatgtagtcactattgcgacgaatcatttcattatgaaatgc
aagtctggatggaatcttcttcaatatcatgtgagttttaatatcgaagaggatcggact
tatatgaagaagaaatatgtgaaacaagttgcgaataaactaccaccttatatttgtgat
ggggcaacgctatttactgtaactccgctcacacatgataactcgccttttgagatttgt
actaaaagagaggatgatgggaaaatgattgggattaccatgaagtatactcgtcaggtg
tctcccatggattttagttactttcaatttttcaatataatcttaagaagatgtatggaa
aatctggatcttcagatgctggataggaattattatgatccaaatgccaaagttacgctc
acagacctacatttggaattgtggccggggtacataacttctattcgtagacatgaaaaa
gaagtgttactttgctgcgaaatatccaataaaattctaaggacagatactgtctattct
cagttaaggactgcttcggctactggggatgttaggaatgctgcaacgaggttattgcta
ggagaaatagtaattactaggtataataacaaaacctataaaattgatgatatcgattgg
aacacaactccatcctcaacatttccgaaaagggacggctcttccatgagtttttcggat
tactatcgagagagatacaatatcactattaaagatttgaaacaacccctgctcatatct
ttgcctagagaaagggatcgtagaggaggcaatatggataaaaaccaaagaattatgctg
gtgcctgaactatgctacatgactggcttgagtgaatcccaaagatcaaactttagtctc
atgaagagtttgggagagtatacccgccaagatccagcgaatagatgctcatctctaaag
aagttttctcaaaggcttttatcttctccttcagttaaagaggaactgaagaaatggaat
attgaattggatgacaaattacgtacgtttcagggaagatctctccctcctgaggttatt
cttgaaggcagtggcaagaaaattagttacccagtagagaatgctgattgggggagtact
tttcggaacatgaaactttttcaacctgctcactgtcagaaatgggtggtcatctcccca
catagattaaggaatgaaaccagtgattttgtaaagggattattgaaagtatctaatggc
atgggctttcaacttgatgctccaaaactttttgagatacaagatgatagagtggggact
tatgtgaatgaaataaattcaactctctgtctaagacccccaccgcaaatgattatggtt
gtcgttcccagaaatactggggatgcttactcagcaattaaaaaaatttgctgcgttgaa
aagccgataataagccaagttataaccggtactttgcttaaaaaacccaagggtctgatg
tctgttgcaaccaaagtggccgtgcagatggcaacaaagttgggtgctgagccatggggg
gtatctatccccattaaaaacacgatggttataggttacgattcctaccacgacacaagt
ttaaaaggaaaatctgttggagctgtggtatcatcaattaatgatagcctgactagattt
gtgtcttcagtcacaattcatcagcacaatgaagagctactaaatcagataggtatgtgc
ataagtcgtgcactcagaaaatataatgaagtgaacaacgcataccccaaacggattatt
atatatagagacggtgttggagatgggcaaatagaaaccgtgaaacaacatgaaatacct
gcaatcaaggaggttcttaaaaaattaaacataactcccaagtttacatttatcattgta
tcaaagagagtaaactctagatttttcttgaaaactccccagagaatgcttaatcctgac
tctggaacggtcattgatgacgttgtcacactgcctgaaagatatgacttttttctcgtg
tcccagagtgtaaggcaaggaaccgtaaatcctactagttacaatataatagaagatgag
agtgggctcaaaccggaccacatacaaaaactcacttacaaattgactcatttgtattat
aattggcctgggactgtccgtgttccctctgtatgtcaatatgctcataaattggcatat
ctcgtgggaacttcgatccatcaggatccagacgcgagtcttgattctacactatattac
ttgtaa
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