Lepeophtheirus salmonis (salmon louse): 121114500
Help
Entry
121114500 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K14323
protein CASC3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013
Nucleocytoplasmic transport
lsm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121114500
03015 mRNA surveillance pathway
121114500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121114500
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121114500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
121114500
NCBI-ProteinID:
XP_040564422
LinkDB
All DBs
Position
3:complement(1023051..1025427)
Genome browser
AA seq
595 aa
AA seq
DB search
MSDQNKENRSRSASKESHISERSVSPHEKEEVEEEEEQPKEDEDENSDYASAHEEESPKG
EECAEGEEGALEEAKEEGKTGGVDDDQDRRNPQYIPKRGVFYEHDDRIDSEEEEEEVLKK
GVGSTLPGRRVPKSEASCRWGHDKFAEMDQSPKTKDELVSVYGYDIRNEDTAPRARRRRK
YGRGPNKYTRKWENEDAYVKSSGRGGQSHKGSRGGSIIIKKTGKRIVPEEELPNNPESKE
IPPPAQKKEDIKSSKSYSKEQQSFKKDSNKVRPEHTGKTFHSKSIDSSSSKVEHLEKSLS
RTHINNRQSLPPRRSYEKNNSNQLTLSHTSVEILPTKPKRYSTQRQRNNNGASSRKDDTT
TSNSTYYKRGNTFQTNSSDYPTTSVAYSNSTPFASTTTGGSVFHPSRSSQGGGPPPTAQT
VPPPYMNPNGLVNYGPPPPVQYTVPVTVPVTVPLTMSLVPPQPENYSGVPLVPGPTTANP
PLLPPTAHHIGAPELMAAAALGGGVPTGNGAPPNTGYAEVRGGVTYFNPTVQAPILMRPV
NKRPKAAIPIIDPSNLSVEKTLSSCETSDTTVESSDKNSVDIMASTSNESAKLVT
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcaaaataaagagaaccggtctcgatccgcttcaaaagaatctcatatttcc
gagagaagtgtctcgcctcatgagaaagaggaggtggaggaggaggaggaacaacccaag
gaagatgaagatgagaactcggattacgcgagtgctcacgaagaggaaagtcccaaagga
gaggaatgtgcggaaggcgaagaaggggccttagaagaggcgaaggaggaagggaagacg
ggcggtgtggatgacgaccaggaccgtcggaaccctcaatacattcccaagagaggcgtg
ttttatgagcatgacgatcggattgactctgaagaagaggaggaggaagtattgaagaaa
ggtgtaggatccacccttcctgggcgccgtgtccccaaatctgaagccagttgcagatgg
gggcatgacaaatttgctgaaatggatcaatctcctaagacaaaagatgagcttgtgtca
gtctacggttatgacatccggaatgaagatacagctccacgtgcacgaaggagacgaaaa
tacgggcgtggtcctaataaatatactcggaagtgggagaatgaagatgcttatgttaaa
tcaagcggaagaggaggccaaagtcacaaaggatctcgtggtggttctattataataaaa
aagactggcaaaagaattgtgcctgaagaagaactgcccaacaatccagagagcaaggag
attccgccacctgctcaaaaaaaggaagacatcaaatcctccaagtcttattcgaaggag
cagcagtcttttaagaaggacagtaataaagtccgtcctgaacatactggaaagactttt
cattctaaatcaattgactcttcttcctctaaagtagaacatttagaaaagtcacttagt
cggacacatatcaacaacaggcaatcgctgcctccacgtcgttcttatgaaaaaaataat
tctaaccagttgactctttcacatacatcggtggaaattttgcctactaaacccaagcgc
tattcaactcaacgtcaaagaaacaacaatggcgcttcttcaaggaaggatgacactact
actagtaactcaacctactataaacgtgggaatacgtttcaaacaaactcttctgattat
ccaaccacttctgttgcctattcaaattcgaccccttttgcttccactacaactggagga
tctgtttttcatccttcaaggtcttctcagggaggaggaccaccccccactgcacagact
gttccacctccatatatgaaccctaatggtttggtaaattatggaccaccaccccctgtt
caatatactgttccggtcacggtaccagtaactgtaccattgacaatgtcactagttcca
ccacagcctgaaaactattctggtgtcccactcgttcctggacctacgactgcgaaccct
ccacttttacctcccacagctcatcatataggagcacctgaattaatggcagctgctgcc
ttaggaggaggtgtaccaacaggaaatggtgctcctcccaacacaggttatgctgaggtt
cgtggtggtgttacttactttaaccctactgtccaagcacctattttgatgcggcctgta
aataaaaggcccaaagcggccattcccattattgatccgtcgaatctcagtgtagaaaaa
actttaagttcttgtgaaacttctgacactactgttgaatcatctgacaagaatagcgtt
gatattatggcttcaacttctaatgagtctgccaaactcgtgacttag
DBGET
integrated database retrieval system
