Lepeophtheirus salmonis (salmon louse): 121114547
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Entry
121114547 CDS
T08214
Name
(RefSeq) high mobility group protein DSP1
KO
K10802
high mobility group protein B1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03410
Base excision repair
lsm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121114547
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121114547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121114547
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121114547
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121114547
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
121114547
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
121114547
MMR (mismatch excision repair)
Other MMR factors
121114547
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121114547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
Cofac_haem_bdg
Cas6b_C
Motif
Other DBs
NCBI-GeneID:
121114547
NCBI-ProteinID:
XP_040564476
UniProt:
A0A0K2THW5
LinkDB
All DBs
Position
3:complement(26602666..26604422)
Genome browser
AA seq
202 aa
AA seq
DB search
MPNSKAKQLPKKAMTAFLFFFSVCRDEYKRRHPEEDFNGREIKYKCGERWKTMSLEEKKR
FNQMAEDDKKRYELELHITRPVLAARATKGKLVGKDISLDTKLKKNRLKDINAPKRIVQP
FMWFAKESRQKVAAANPDFSYAEITKEVARRWSELDPAEKEKYTVLHKKDKVRYAQEKKA
YKKKQVKVPTEILESDDTEDES
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatagcaaggcgaagcaattgcctaagaaggccatgactgcttttctgttcttt
ttcagtgtttgccgagacgaatataaaagacgacatccggaagaggattttaatggccgt
gaaattaagtacaaatgtggagagagatggaagaccatgagtttggaagagaagaagcgt
ttcaatcaaatggcggaagatgataagaagcgatatgaattggaattgcatattactcgc
cctgtgctggctgcaagggctacgaaggggaaactggtcggcaaggatatttccctggat
acaaagttaaagaagaatcgactcaaggatattaatgcacccaagcgtattgtacaacct
tttatgtggtttgccaaggagtcccgtcagaaagtagcggctgcaaatccggatttctca
tatgcggaaataacaaaagaagttgcacgaagatggtctgaattagatccagctgaaaaa
gaaaagtatactgtattgcataaaaaagataaagtgagatatgcacaagaaaagaaggcc
tacaaaaagaaacaggttaaggtacccacagaaatactagaatccgatgatactgaggat
gagagttga
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