Lepeophtheirus salmonis (salmon louse): 121114554
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Entry
121114554 CDS
T08214
Symbol
swm
Name
(RefSeq) RNA-binding protein 26
KO
K13192
RNA-binding protein 26
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121114554 (swm)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121114554 (swm)
03041 Spliceosome [BR:
lsm03041
]
121114554 (swm)
Protein phosphatases and associated proteins [BR:
lsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121114554 (swm)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
121114554 (swm)
Spliceosome [BR:
lsm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121114554 (swm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
PWI
RRM_Nup35
RRM_1
zf-CCCH
zf_CCCH_4
RRM_PARP14_3
Hemolysin_N
Motif
Other DBs
NCBI-GeneID:
121114554
NCBI-ProteinID:
XP_040564484
LinkDB
All DBs
Position
3:complement(26512085..26515916)
Genome browser
AA seq
824 aa
AA seq
DB search
MLIENPESLKAWLTSVIEPLCDADPSALAKYVIALIKKDKAVSELRESMQEQMDVFLQGE
TKNFTRQLFEALDSKSYLSAALSQAQTPLEEEELPKPTDAVKVEEEEPPQPPHQPPRPVV
KRAEDERHRRRRCSPFRSTNSRRRRFRSRSPSYSSSKRRRSPYNGRRSRSPRRSRDSVSP
PKEEEENGYTPSTKKRPPRCRDYDEKGFCMRGDMCKFDHGTDAVVLEDSSTPNPTSVPPP
PYLPVSAPTAPYTTPDPYVPVSTVVPPTSGALVLPPLHVPPPGYAVPHTTHSSDPSRKRS
FEGSNSDGYPPHKRFDFNRLGNRGGRGGPRGSSNGRNMTSKLAVRNIPPLYNNIAQLNNH
FARFGVLVNVQVQFEGDPGSALVTFSKPTEAESAFSSSEAVMGNRFIKMFYHYDRPNFNS
SLLSVKDRLGVDKNKTSEHSGDGSLDNGKPKDENGSSISQKAEEKAAEIAAIQKNQELLK
ANAELKKKQEDKKKEAVKNLSDLQRSKQSLLEKLIAQQKALIVKFEKSENQDEKTEIMKL
SKVLTFQIENAREDVKKAMQASQVKKTPGELQKELLDAELELFNKQQNGNDTTELQKRVN
TLKIEAARCGVLPTSRLPRGRAGYFRGGRGYRVSPYGLSSYRGGRGGITRGRGRGYGLTS
VDRRPSKILVSGFEVDDKEEVITHFQKFGEIVDTIEDDSTPSFVFQFKLRRDAENAMNNG
GKSCGDRVLQLSWYNNSNSEEFTSECDDKNVHETVLDEDDYTPLDHAYIPPGLEENDKSQ
SSDKDEKELNVDDLLYDGPEDEEEEEEEEEEERSWKRDHHRHQH
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcgagaacccggaatctttgaaggcctggcttacctctgtcatcgagccgctg
tgtgatgcggatccgagtgccttggccaagtatgtcattgcactcatcaagaaggataag
gccgtgagcgagctgcgtgagagcatgcaagagcagatggacgtgttcctccaaggggag
acgaagaactttacgcgtcagctctttgaggccctggactccaagtcctacctttccgcc
gccctgagtcaagcacaaactcctcttgaggaagaagaacttcccaaacccacggacgca
gtcaaagtggaagaggaagagcctccccagcctccgcatcagcctcctcgcccagtagtc
aagagagcagaagatgaaagacaccggcgacgcagatgcagtccctttcgcagcacgaat
tctcgtcgacgccgcttccgctccagatctccctcctactcgagcagtaaaagaagacgg
tctccctacaatggcagacgatctcgatcgcctcgtcgaagtagagactccgtctcacct
cccaaagaagaggaagaaaatggttatacgccttctacgaaaaaaagaccacctcgatgt
cgagactatgatgaaaaagggttttgtatgcggggagatatgtgcaaatttgaccatggt
acagatgctgtagtactagaagactccagtactcccaatccaacttctgtaccaccaccg
ccctatctgcctgtgagtgcacccactgcaccttacaccactccagatccgtatgttcca
gtatctaccgttgtgcctccaacctctggggctttagtcctacctccgttacatgtccct
cctcccggttatgcagtacctcatactactcattcctcagatccctctcgtaaacgcagc
tttgaagggtccaatagtgatggatatccaccacataagcgttttgattttaatcgtttg
ggtaacagagggggccgtgggggacctcgtggtagttctaatggccgtaatatgaccagc
aaactggctgttagaaatattccaccattatataacaatatcgctcagttgaacaatcat
tttgctcgattcggagtcttggttaatgttcaagtacagtttgagggagatcctggttct
gccctagttaccttttctaaacccacagaggctgaatctgcattcagttcctcagaagcc
gtcatggggaatcgctttatcaaaatgttttatcattatgatcgtcctaacttcaattct
agtcttctctccgttaaagatcgactcggagttgataaaaataaaacgtcggaacattcg
ggtgatggctctctcgataacggaaagcctaaagatgaaaacggctcttcaatctctcag
aaagctgaagaaaaagcggctgaaattgctgctattcaaaagaatcaagaactcctgaaa
gctaatgcagagcttaagaagaaacaggaagataaaaaaaaagaggctgtcaagaatcta
tcagatcttcaaagatcaaaacaatccctcttggaaaaactcatcgctcagcaaaaagct
cttattgtcaaatttgagaaaagtgaaaatcaagatgaaaaaacagagataatgaaactt
tccaaagtactaacatttcaaattgaaaatgctagggaagacgtgaagaaagcaatgcaa
gcgtctcaggttaaaaaaactcctggtgaattacaaaaggaactattggatgcagagttg
gagcttttcaataaacagcaaaatggaaatgatacgacagaattgcaaaaaagggttaac
acactcaaaattgaagcagcgagatgtggcgttttacccacctcaagactaccaagaggg
cgagctggatatttccgtggaggaaggggatatcgagttagtccttatgggctctcttct
tacagaggtggacgaggaggtataactcgtggaagaggtcggggttatggtcttacgtct
gttgatcgtagaccatcaaaaatattagtatcaggcttcgaagtagatgacaaagaagaa
gtgataactcactttcaaaagtttggtgaaatagttgacaccattgaggatgactctact
ccttcctttgtttttcaatttaagctgcgtcgagatgctgaaaacgccatgaataatggg
gggaaatcatgtggagatcgtgttcttcaattatcatggtataacaattcaaattccgaa
gagttcactagtgaatgtgacgataagaatgtccatgaaactgttttggatgaggatgac
tatactccgcttgatcatgcttatatacctcccggattagaagaaaacgacaaatcacaa
tcctctgacaaagatgagaaggagttaaacgtagatgatttattgtatgacggacctgag
gatgaggaggaagaagaagaagaggaagaggaggaaagaagctggaagcgtgatcatcat
cgtcaccaacattaa
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