Lepeophtheirus salmonis (salmon louse): 121114591
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Entry
121114591 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
lsm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121114591
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121114591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121114591
03036 Chromosome and associated proteins [BR:
lsm03036
]
121114591
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121114591
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121114591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
WD40_Prp19
F-box-like
Beta-prop_EML_2
Beta-prop_SCAP
F-box
Pep3_Vps18
Beta-prop_SPT8
Beta-prop_EML
EIF3I
Motif
Other DBs
NCBI-GeneID:
121114591
NCBI-ProteinID:
XP_040564534
LinkDB
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Position
3:20712365..20714577
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AA seq
404 aa
AA seq
DB search
MALIIMDIIGELYARNQSYFVKMILIYAGHNSVCSCLLTCRSWYNMIRHGIGDWEGLVKR
IMYENNLFLSLESAIFRERKLSPQIKFFNMTDLRTGIIQNKKNPRSWTLSAGGAITYFLL
HLNILYTGMKDGRIKMWSMKPSEKALGCLKSRKNFPVLALTARKNILINSNYDISLCVWD
LRTKALLRVLNSQALLYSLKLSSTHLLALSWAPESQIKCICFGINSHYDLEIKDYSPEVP
HNQPFSFLDDKYFIHEDNVISRYELSEFNYFERDVVIHGLTHRVSSLDVIGDLLVYVLDN
GRIHFHDLNTSQEIYAFLVPELIGHHSVSLRISMDYTIIISVLGYEDFIFFCHMRDLENN
SYTFRVEKHAFLAFNRLKVVYRETNSLTSLKVIELMPDYSVEDQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcattaatcatcatggacattattggagagctctatgctagaaatcaaagttatttt
gtgaaaatgattctaatttatgcgggacacaattctgtttgtagttgtcttttaacttgt
cgctcttggtacaatatgatccgacatggaattggggattgggaaggccttgtaaaaaga
attatgtacgaaaataatctgtttttatccttagaatccgccatttttcgtgaacgtaaa
ctctcacctcaaatcaaattttttaatatgacagatctcaggactggaataattcaaaat
aaaaaaaatcctcggagttggacgctatctgcggggggagctattacatattttttattg
catttgaacattttgtatacgggaatgaaagacggacggatcaaaatgtggtccatgaag
ccttccgaaaaggcactaggatgtcttaaaagccgtaagaacttccctgtcttggctttg
actgcacgtaaaaacatcctaatcaactctaattatgacatttccctctgtgtttgggac
ttgagaactaaagcacttctaagggtcttgaattctcaagcactcttatatagcttaaaa
ctttcttccactcatttgttagcattgtcatgggctcctgaaagccaaattaaatgtatt
tgctttggtattaattcacactatgacctggaaataaaagattattcccctgaagtaccg
cataatcaacccttcagttttttggatgacaaatatttcattcatgaggacaatgttatt
tccagatatgaattatctgagtttaactattttgaacgggacgtagtcatacatggactt
actcatagggtcagcagtttggacgttattggagatcttctcgtttatgtactagacaac
ggaagaattcattttcatgatttaaatacttcacaagaaatatatgccttccttgtccca
gagttgattggtcaccattctgtatcacttcgaatatccatggactacacaatcattatt
tccgtgttaggatatgaggatttcatatttttctgtcatatgagggatttagaaaataat
agctatacattccgagtagaaaaacatgcttttctcgcctttaataggctcaaagtcgta
tatagggagaccaattccttgacatcattaaaggtgattgagttgatgccggactattcc
gtagaagatcaataa
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