Lepeophtheirus salmonis (salmon louse): 121114601
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Entry
121114601 CDS
T08214
Name
(RefSeq) SET domain-containing protein 4
KO
K07903
Ras-related protein Rab-10
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121114601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121114601
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121114601
04031 GTP-binding proteins [BR:
lsm04031
]
121114601
Membrane trafficking [BR:
lsm04131
]
Exocytosis
Small GTPases and associated proteins
Rab GTPases
121114601
Protein recycling
Rab GTPases and associated proteins
121114601
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121114601
Exosomal proteins of other body fluids (saliva and urine)
121114601
Exosomal proteins of colorectal cancer cells
121114601
Exosomal proteins of bladder cancer cells
121114601
GTP-binding proteins [BR:
lsm04031
]
Small (monomeric) G-proteins
Rab Family
Rab8/10/13 [OT]
121114601
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
Motif
Other DBs
NCBI-GeneID:
121114601
NCBI-ProteinID:
XP_040564548
LinkDB
All DBs
Position
3:20838087..20842675
Genome browser
AA seq
397 aa
AA seq
DB search
MGRRYRRKQRKERNVSEYGKNASHESIEFIRWLHNLGWNPNTNLRLSFFSSTGRGLMALS
PIESNSLIIRVPYEFVITRSKAQCQTNDTRTTHDVLAQFLTQESALREASKWFFYIKSLP
SSYDVPFFIPEDEALNALPSFWREPVLEQKERLKNSLTNAWAYFTVNTRAVYHSDGGMAL
IPFLDMFNHSPHVSVSINEARDGSFEIISGPHCVRKFDQVFINYGPHSNIKLFLEYGFWI
ANNPHDAIPITLSELTSVLLEGKGMSTLRNNDSKKLTLLKDNKIDQNMCLAITSSKIHET
KEESASLASPSWNIYACFDILKRDDASSLVYSQIYRDNLEMDNRDLVISLMKNKLRELKA
SANALKNSFNHIRSCCMASELLFTYVCAIESALALFK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaagatatcgacgtaaacaacggaaagaacgaaatgtttcagagtacggaaag
aacgctagtcatgaatctattgagtttatacgttggttacataatttaggatggaatcca
aataccaacttgcggttatcctttttttcttctactggaagaggcctcatggctctctct
cctattgagtcaaactctcttataatccgtgtaccttacgagtttgtgattacacgctct
aaagctcaatgtcaaactaatgatacaagaactactcatgacgtcctcgctcaattttta
actcaagaatctgctctaagggaggcctcaaagtggtttttctatatcaagtctcttcct
agtagctatgatgttccttttttcatacctgaggatgaggctctcaatgctctcccatct
ttctggagagaacccgttctggaacaaaaagagaggctaaaaaacagcttaactaacgct
tgggcttatttcactgtcaatactcgtgcagtctatcactctgatggtggcatggcactc
atccctttccttgatatgtttaatcattcccctcatgtctctgtctccattaatgaagca
agggacggatcatttgaaatcatctcaggtccgcactgtgtacggaaatttgaccaagtt
tttatcaattatggtccccatagtaacatcaagttgtttttggagtatggtttctggatt
gcaaacaatcctcatgacgccatacctatcactctatctgagttaacaagtgttcttcta
gaaggcaagggtatgagtacattaaggaataatgattctaaaaagcttacactccttaaa
gacaataaaatcgatcaaaatatgtgtctcgctataacatcatcaaaaatccatgagacg
aaagaagaatcagcgtccttggcctcaccctcatggaatatttatgcttgttttgatatt
ttgaagcgtgatgatgcttcgtctttggtatatagccaaatttatcgtgacaatctagaa
atggataaccgggatttggttatttccctgatgaaaaataaacttagagaattgaaagcc
tctgctaatgctttgaaaaattcatttaatcacattagaagttgttgcatggcttcagaa
ttgctatttacttatgtatgtgctattgagtcggcattagcattgttcaaatga
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