Lepeophtheirus salmonis (salmon louse): 121114708
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Entry
121114708 CDS
T08214
Name
(RefSeq) polycystin-2-like
KO
K04986
polycystin 2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsm03037
]
121114708
04040 Ion channels [BR:
lsm04040
]
121114708
Cilium and associated proteins [BR:
lsm03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121114708
Ion channels [BR:
lsm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121114708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Prefoldin_3
Baculo_PEP_C
DUF7310
Trp_repressor
Motif
Other DBs
NCBI-GeneID:
121114708
NCBI-ProteinID:
XP_040564688
LinkDB
All DBs
Position
3:complement(23206798..23211045)
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AA seq
743 aa
AA seq
DB search
MSNKGPAWQDEDKMTTMEDSALLNENTPSRGCWYIFSKAIGGMWVTREMQSSTKREIYVR
TTIRELLIYFMFLLVLCILTFGRTSPTSFYYTTVMSQLFEERNSVSKVEDLWKFMNNDLL
NGLYWEYYYNTGNPRNFICPGGDESVGPCPVSPADRNILYENRLLGLPRIRQIRVKNDSC
SIHQDLQKAIKVCYNSYHPSIEDKTPFQTGIRIKTQAEAWRYQSSETLSGTDTWGLLTTY
SGAGSIQNLHSLRNESSAIVNELMENLWIGRGTRFISIDFTVYNANINLFCIVKLIFEFP
ATGGIIPSSTFQTVKLLRYVTTGDYFILANELIFAIFIIYYIIEEFIEIKKHRTKYFNSV
WNNLDIFVIVISLVVISFNIYTNYVVENKLRELLSRPDKYADFTYLGFWSKQNSNAIAIC
VFFAWVKLFKYISFNKTMTQLSSTLSRSSKDVAGFGTMFFIVFFAFAQLGYLLFGTQVRD
FSSFADSVFTLLRTILGDFNFNEIQEANRILGPIFFLSYVFFVFFVLLNMFLAIINDTYS
EVKAELSSHRNEFEVGDYFKRGYNNILGKICTRNRRIDLENALKLANLDGEVTYEEIRQN
LKKYNFSDMEIELFFSRYNSDNNAIMDGTEEGRVMPDLKKSEMCEIPMERPKSGKDARGI
RSAQIKSRLGSAFSNKLSSQELEVLDRRVDRVEGSVNSIVSKINNVLQKLESLERGKAKK
KATMSKILDNFTEDSIPTKNKKD
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaaggacctgcttggcaggatgaagataaaatgacaacaatggaggatagt
gcacttctaaatgaaaatactccttcaagaggatgctggtatatattttcaaaagccatt
ggaggcatgtgggtaactcgggaaatgcaatcttcaacaaaaagggaaatttatgttcga
acaactattcgtgaactattgatttacttcatgtttctacttgtgttgtgcatattaact
tttggaaggacatctccgacttctttttattatacaaccgtgatgtcacagttgtttgaa
gaaaggaattcggtttctaaagttgaggatctatggaagttcatgaataatgacctttta
aatggcctgtattgggagtactactataatactgggaatcctcgtaatttcatatgtcca
gggggagatgaatctgtcggaccgtgtccagtatcacctgcagatcgtaatatcctttat
gaaaatcgacttctagggttacccaggataagacaaattagagttaaaaatgattcctgt
tcaatccatcaagatttacaaaaagctattaaggtatgttataattcatatcatccatct
attgaggacaaaacaccctttcaaactggcattagaataaaaactcaagctgaagcttgg
cgatatcaaagttctgagactctatctggaactgatacatggggattactaacaacatat
tctggagcaggttcaattcaaaaccttcattctcttcgtaatgaaagttctgctattgtt
aacgagcttatggaaaatttatggattggaagaggaacacgctttatttcaattgatttc
accgtctacaatgctaatattaatcttttttgcattgtgaaattaatatttgagtttcca
gctactggcggaataattccctccagtacttttcaaacagtcaaattgctacgctatgtt
acaacaggagattatttcatacttgcaaatgaattaatttttgcaattttcatcatttat
tatataattgaggaatttatagagataaaaaagcatcgaacgaagtattttaatagtgtt
tggaataatttggatatttttgttatcgtcatatccctcgtcgtcattagctttaatatt
tatacaaattatgtggttgagaataaattgagggaacttctgagtagaccagataaatat
gccgatttcacttatcttggattttggtccaaacaaaattctaatgcaatagccatttgt
gtcttttttgcatgggttaagctttttaaatatatctccttcaacaaaactatgacccag
ctttcttctacactttcaagaagctccaaggatgttgcaggatttggaacaatgttcttc
atcgtattttttgcttttgcacagttgggatatcttctatttggtacacaagtgagggac
ttttcaagctttgcagactcagtatttacacttttgaggacaattcttggggattttaac
tttaatgaaattcaagaagcaaatcgtattttaggcccaatttttttcctctcatatgtg
ttttttgtctttttcgttctcttgaacatgtttttggccattataaatgatacctattcg
gaggttaaggcagaactatcatcacatagaaatgagtttgaagttggagattatttcaaa
aggggatataacaacatcttaggtaaaatatgcacacgcaacagaagaattgatctagaa
aatgctcttaaattggccaatctcgatggagaagtaacttatgaagaaattagacaaaat
ttaaagaaatataacttttcggatatggaaattgagctgttcttctcaagatataattcc
gacaataatgctataatggatggaacggaagaagggagagttatgcccgatttaaagaag
agtgaaatgtgtgaaataccaatggagagacctaaatcagggaaagatgcaagaggaatt
cgatctgctcaaataaaatcaagactgggatcggctttttcaaataaattgtcctctcaa
gaattggaagtattagaccgacgagtcgatagagtggaaggatctgttaattccattgtt
tcaaaaataaataatgttctacaaaagttagagtctttggaaagaggaaaagctaagaaa
aaagcaacgatgagcaaaatacttgacaattttacggaggattcaattccaaccaaaaat
aaaaaagattga
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