Lepeophtheirus salmonis (salmon louse): 121114737
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Entry
121114737 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: hepatocyte growth factor-regulated tyrosine kinase substrate
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03250
Viral life cycle - HIV-1
lsm04144
Endocytosis
lsm04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121114737
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121114737
04145 Phagocytosis
121114737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121114737
Membrane trafficking [BR:
lsm04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
121114737
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hrs_helical
VHS
FYVE
UIM
Motif
Other DBs
NCBI-GeneID:
121114737
NCBI-ProteinID:
XP_040564718
LinkDB
All DBs
Position
3:complement(23459983..23463599)
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AA seq
697 aa
AA seq
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MFRGTSNFDRLLEKCTSQMNMEMDWTSIMNLCDSIRSGETNPKYAVLQIKKKFTHANPHV
SLFALQVMESCVKNCGSFIHEEIATREFMEEIRELVKATKDDAMKGKLLEMIQTWGHAFS
KSQKYRICTDTYNIMKAEGWKFPPVVEADAMFEADTAPAWVEGTVCHRCRVEFGVMTRQH
HCRACGQVFCSKCSSKSCNLPKFGIEKEVRVCESCFDTHGPKDHISPINKSGRMAGNTED
LPPEYLSSSLAQQNQTPTKTGKSEAEIKEEEELQLAIALSKSEAEEKEKKXKYRSSAIQN
NSNNYNDSKSESSSKLPENEIDPELMRYLDRDFWEMKEKEKAKNNNQMQQHLQQQQISNT
KKEMINKVDLEVDSEIDTLEIQKASESSSKESLEIQDFITTLKTQVEIFVNRMKSNSSRG
RSITNDSSVQTLFMNTMSMHSQLLRYIQAQEDKRVYYEGLQDKLVQVKDARAALNALRDE
ERERKRREAEEAERIRQAQMQEKLEVMRKQKQEFLQYQRQVALQRMQEQEREMILRQEQS
QHQMYMGVNPPPQAPQVYGMWPQQVGQPPNAMPFYPQQGYPDPYNMQMMGGALPNMGQPQ
SSFNSSAVQQTQPQPPMGNIMPSQSNIPGIHSSNPQQPPPPMQASIPSPSPHIQANLPPH
SQLQSIIPGAHNVAPATSLPPHPPPEKPLEAELISFD
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtggaacgagtaatttcgatcgactcctggagaaatgcacctcccaaatgaat
atggagatggattggacaagtattatgaatctctgcgacagcatccgaagtggtgagacg
aatcccaaatatgcagtgttgcaaataaagaaaaagtttacacatgcaaatccacacgtt
tctttatttgcccttcaggtaatggaatcttgtgttaagaactgcggttcctttatccat
gaagaaattgcaactcgagaattcatggaggaaatccgggagttggtcaaggctacaaaa
gacgatgccatgaaaggaaaacttctggaaatgattcaaacatgggggcatgcctttagt
aaatcacagaaatatcgtatttgcactgatacatataatatcatgaaggctgaaggatgg
aaatttcctccagtggtagaagcagatgccatgtttgaggcagataccgctccagcttgg
gttgagggaactgtttgtcaccgttgtcgagtcgaatttggagttatgactcgacagcat
cattgccgtgcttgtggtcaagtattctgctccaaatgttcttctaaatcctgcaatttg
cctaaatttggtatagaaaaagaggttcgagtttgtgaatcatgctttgatacccatgga
cctaaagatcatatatctcccatcaataagtcaggacgtatggctggtaatacagaagat
ttgcctcctgaatatctttcttcctcgttagcacaacaaaatcaaactcctactaagact
gggaaaagtgaagctgaaatcaaggaggaagaggaacttcaattagctatcgctctgtct
aaatctgaagctgaagagaaagaaaaaaaanntaaatatagaagctctgcaattcaaaat
aactcaaataattataatgactccaagtcggaatcatcttctaaattgccagaaaatgaa
atagatcctgagttgatgcgttatcttgatagagatttttgggaaatgaaggaaaaagaa
aaggctaaaaataataaccaaatgcaacagcatttgcaacaacagcagatatccaatacg
aaaaaagaaatgattaataaggtagatttagaagtagattccgagatagatacgttagaa
attcagaaagcctctgagtcttcttcaaaagaaagtctagaaattcaagatttcataaca
acgcttaaaactcaagttgaaatctttgtgaatagaatgaaatccaattctagtcgagga
agaagtataaccaatgattcatctgtgcaaacactttttatgaatactatgtcaatgcat
tctcaactgctcagatatattcaagctcaagaagacaaaagggtttattatgaaggactc
caggataagcttgtacaagtaaaagatgcccgtgcagctttgaatgcacttcgggatgag
gagagagaacgtaaacgccgtgaagctgaggaagcagaaaggataagacaagctcaaatg
caggaaaaactcgaagtaatgcgaaagcaaaagcaagagtttttgcaataccaaagacag
gttgccctgcaaagaatgcaagaacaggaacgagaaatgattttaagacaagagcagtca
cagcatcagatgtatatgggagttaacccaccgcctcaggctccccaagtatatggaatg
tggcctcaacaagtaggccaacccccaaacgctatgcctttttatcctcaacagggatat
cctgatccttataatatgcaaatgatgggaggagctttacctaatatgggacagccacaa
tcttcatttaattcatcagccgttcaacaaacccaaccacagcctccaatgggaaacatt
atgccttctcaatctaatattccaggaattcattcgtccaatcctcaacagcctcctccc
ccgatgcaagctagcattccctcaccgtctccccatattcaggctaaccttcctcctcat
tcacagcttcagtctataataccaggtgcacataatgtcgctcctgctacatcccttcct
cctcatccccctcctgagaaacctttagaggccgaattaatttcttttgattaa
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