Lepeophtheirus salmonis (salmon louse): 121114786
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Entry
121114786 CDS
T08214
Name
(RefSeq) F-box/WD repeat-containing protein 9-like
KO
K10265
F-box and WD-40 domain protein 9
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121114786
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121114786
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_TEP1_C
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_EML
KNTC1_N
F-box-like
Beta-prop_IP5PC_F
F-box
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_SCAP
WD40_like
Beta-prop_DCAF12
Beta-prop_WDR19_2nd
Beta-prop_EIPR1
PQQ_2
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Ribosomal_L7Ae
Pyrid_ox_like
DUF6621
Motif
Other DBs
NCBI-GeneID:
121114786
NCBI-ProteinID:
XP_071742951
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Position
3:25535486..25536609
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AA seq
356 aa
AA seq
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MEILPDEILLHICSFLDAKFIISVISRLNRRFYILVTDPTNYKIRLRRRWKSQYPVVEKE
TDWRKACVYREEENRIWSNLNETLNKVELPTSAGISVDSVLITSDLIIAGSRDRSLTAWN
INNNTSTKPMQTICKAHDGWIWSLCASETDKVYSGSWDTKVKLWELTPSASSSLICAGTF
DKKVVLFDARSHKRLGTGCYHKKAVLALAISSDYIISASEDNNVIFFDRKTHRRAQTLKF
DHYITSLYLYEDALYCGDKAGGIHVVHVKTLKVIQSYPSTHSNQVTGVHCGLGSVVSCST
DGTVKVFQPDLSMENINVIEDTKEQQMTGICYDECRNVLVSGQMGSVHLWRPKVVN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggaaatattaccagacgagatccttcttcacatttgctcctttctggatgcaaagttt
ataatttccgtgataagtcgattgaatagacgtttctatatcttagtaacggaccctact
aactataaaatccgtttgcgacggcgttggaagagccagtatcccgtagtggaaaaggaa
acagactggagaaaagcttgtgtgtatcgtgaggaagaaaatcgcatatggagtaatttg
aatgaaactttaaacaaagttgaacttcccacttctgctggaatctctgtggactcagtt
cttattacttcagatttaatcattgcaggctcaagggatcggagtctcacagcttggaac
attaataacaacacaagcactaaacctatgcaaacaatatgtaaagcacatgatggatgg
atatggtcattatgcgcttctgaaactgataaagtctactcaggatcctgggatacaaaa
gttaaactctgggaattaactccttcagcatcctcaagtctcatttgtgctggaactttt
gacaaaaaagtcgttctctttgatgcaaggagtcacaaaagactaggaacgggttgttat
cataagaaagcggtattggctctagccatctcttctgactacatcatatctgcttctgaa
gataacaacgttatattttttgatcgaaaaactcatagaagagctcaaactcttaagttt
gatcattatatcacaagcctttatttatacgaagatgctctctactgtggagataaggcg
ggaggcatccatgtcgttcatgtcaaaacactaaaagtcattcagtcatatcctagtact
cactctaatcaagtgactggagtacattgtggcctcggatccgtggtctcttgctcaaca
gatggaactgttaaagtatttcaaccagatttatccatggaaaatattaacgtaatcgaa
gataccaaagagcaacaaatgacaggaatttgctatgatgaatgtagaaatgtcttagtc
tctggtcaaatgggttctgttcacttgtggcgtcccaaagttgtcaactag
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