Lepeophtheirus salmonis (salmon louse): 121114797
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Entry
121114797 CDS
T08214
Name
(RefSeq) histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121114797
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121114797
04131 Membrane trafficking [BR:
lsm04131
]
121114797
03036 Chromosome and associated proteins [BR:
lsm03036
]
121114797
Enzymes [BR:
lsm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121114797
Protein phosphatases and associated proteins [BR:
lsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121114797
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121114797
Membrane trafficking [BR:
lsm04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121114797
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121114797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
121114797
NCBI-ProteinID:
XP_040564805
LinkDB
All DBs
Position
3:complement(27398732..27402303)
Genome browser
AA seq
747 aa
AA seq
DB search
MEDIRKKSLVEEQGHILVQSMFSLVRTSLQFERMKSYGYERVGTSTGIIYDDRMGDFYCE
WDSTFSECPDRFHSILIRLRELNILDRCVDMKPIRAKDTEVTKFHDLELIEELKRISKIT
DLQELKEMAEKYERIYLHPDVFKCAMLAAGCSIELTRSVFQGKLKNGMAIIRPPGHHALQ
EKFNGYCFINNAVVSAKTGFDLGAERILIVDWDANHGQGIQRAFYNNNRVLYFSIHRYNN
GRQWPNLRESDLDYIGAESGEGYNVNVPLNSTDNGDWEYLAIFQQLLIPLAYEYRPNLVI
IAAGYNAAIGCIEGEQSVSPACFAHLTHSLCAIANGKVVSLLEGGSFIPSLTESVAQTIL
TLIGDRLPRLPSEYKKPKDEVLKTIHEIKTVLRQKWKCFELQDGLDSQISERVWLGPSEE
STEIELQEESEEARSKKMEKKFEDIISNLSSQLNSRNSNVSSYVCFCSDDEKLEPEFLND
SSGKVIWLNTQKALKEELEWLSMQGLNVTVSSSSLLAAGSIFQVIDAVHNNDAIAGISLI
DHTRQTGISDLGPVYGKLKHRINRSMSVILNDGMITPKLNSFICENESILRFNILHSRDQ
DESNPFFDESDENINKHEVTIRLGNYCHPVDSDYLNLMYRILLPVGYEYSPEIIYVYASL
GSGSLSAIGFSHLVHTLSTLANSKIVVIFEGSCNPFDNPRSLLRSVKTLLKDSLPNFEVY
SPSDKNSSIIEKCRKALSVKWESLKDD
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggaagatataaggaaaaaatccttagttgaagaacaaggacatatccttgttcaaagt
atgttttctcttgtcaggacttctctacagtttgagagaatgaaatcgtatggatacgag
agagtaggaacatctacgggcattatatatgatgatcgtatgggagatttctattgtgaa
tgggattctaccttttcagaatgtccagacagatttcattctattctcattcgcctaaga
gaacttaatatcctagatcgatgtgtagatatgaagccaatacgagccaaggatacagaa
gtaaccaaatttcatgatttggagttgattgaagaattaaaacgtatttccaaaatcacc
gatctacaagaattgaaggaaatggctgaaaaatatgaaagaatttatcttcatccagac
gtattcaaatgtgccatgttggcagctggatgtagtattgaactaacgaggtctgtattt
caaggaaaattaaaaaatggaatggcaataattcgtcctccaggacaccatgctcttcag
gagaaatttaatggttattgtttcatcaataacgctgtcgtaagtgcaaaaacaggattt
gacttaggtgcagaaagaatcctcatagttgattgggatgcaaatcatggccaaggaatt
caaagagcattttataacaataatcgagttttgtatttttcaattcatagatataataat
ggaaggcaatggccaaatctaagagaatctgatctagattacataggagctgagagtggc
gaaggttacaatgttaatgttccattaaactctacagacaatggggattgggaatatctt
gctatatttcaacaattgttgatacctttagcttatgaataccgtccaaatttggttata
attgctgctggatataatgcagctatcggttgtatcgaaggggaacaatcggtatcaccc
gcttgctttgcacatttaacccattctttatgtgctatagctaatggaaaggttgtttct
ttacttgaaggaggttcttttatcccttctctcacagagagtgtagcacaaacaattcta
actttgattggtgatagacttccaagattaccatctgaatacaaaaaaccaaaggatgaa
gtattaaaaacaatacatgaaattaaaactgtattaaggcaaaagtggaaatgttttgag
ttacaagatggtctagattcacagatctcagaaagagtatggttgggaccatctgaagaa
tctactgaaattgagctccaagaagaatctgaagaagcaagatcaaagaaaatggaaaag
aaatttgaagatatcatttcaaatctctcgtctcaattaaactcaaggaattctaatgtg
agctcttatgtctgcttctgtagtgatgatgaaaaactagaaccagagtttttaaatgat
tcatccggaaaagtcatttggttaaacactcaaaaagcattaaaagaagaactggaatgg
ctttccatgcaaggtctaaatgtaactgtttcttctagctcactattggctgcaggatca
atttttcaggtcattgatgccgtccacaacaatgatgcgatcgctggtatatctcttatt
gatcacactcgtcaaacaggaatatcagatttaggacccgtttatggaaagcttaaacat
agaattaatcgttccatgtctgttattttgaatgatgggatgattaccccaaaattaaat
tcctttatttgcgaaaatgaaagcattcttcgttttaatatccttcatagtcgagatcaa
gacgaaagcaatccattctttgatgaatctgatgaaaatataaataaacatgaagtaact
attcggttaggaaactattgtcaccctgtggattccgattatttgaatctgatgtataga
attcttcttccagtcggatacgaatactctccagaaataatttatgtttatgcaagtctg
ggatctggatcattatcagcgattggatttagtcatctcgttcatactttaagcacatta
gctaatagtaaaatagtagtcatatttgaaggaagttgcaaccccttcgacaatcctcga
tctcttcttagatctgttaaaacccttctaaaagattccctccctaattttgaagtatat
agccctagcgataaaaattcctcaatcattgaaaaatgcaggaaagccttaagcgtgaaa
tgggagtctttgaaggatgattaa
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