Lepeophtheirus salmonis (salmon louse): 121114870
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Entry
121114870 CDS
T08214
Symbol
sip3
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
lsm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121114870 (sip3)
04120 Ubiquitin mediated proteolysis
121114870 (sip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121114870 (sip3)
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121114870 (sip3)
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121114870 (sip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_11
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-RING_Vps41
DUF2427
Prok-RING_4
zf-RING-like
zf-ANAPC11
zf_RING_Vps8_fungal
RINGv
FANCL_C
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
121114870
NCBI-ProteinID:
XP_040564913
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All DBs
Position
3:complement(29383018..29385618)
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AA seq
613 aa
AA seq
DB search
MMMRRMGLPVLVSLGLSTLGMLHAYHSRSQFYPATIYIVKSNLLMAIAYFQALISVILVG
NLMKKIFLGSLRASEFESLIDRSWYAVLETFLTFAIFKDNFSDKFVGFFSMLLFLKVFHW
LGEVRVNFMEQSPANSALFHIRVLSLAMILAFLDMKLILHSYSSTQQDGDSVQLVFGFEY
AVLLTVVMNFFIKYLLHCVDLRSESPWHNKPIYMLYAELVIGFIKVVLYTLFILITLRIY
TIPLFAIRPMYLNLRALKKTFVGIVSSYQAIYIMDAHYSQATPEQLASADNICTICRDEM
LAQATKILPCNHIFHKSCLRSWFQRQQTCPTCRHDVIQSFRRQRHTQPTPTNNNNVHANN
NNIPAQQPTPLGQAAQQPLHQQIQIPQFPGFNPNIFAQMAAAANIPQQFPFPPPVPQPTT
ATGQQNNASASSTTPTSGNNNTATSSTDSSLPPTPSQFNLPFPFPPPPPFPSMFSSFRPP
PMPPADFRGLSDEELRAMEGNERKNVEARIECLKNIQVLLDAAMLEMQQYSSILSKVDDV
SNNFPLPTAETGARPKESTHNKTPAETGDEKEIIDKMDSNSSPSPSSTESSDKEEVRRRR
LEKFTNIPSDSSS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaggagaatgggtcttcctgtgcttgtatccctgggactctccactctgggg
atgctgcatgcctatcattctcgttctcagttttatccagctacgatttatatagtgaaa
tccaatttgttgatggccatcgcctatttccaggctctgatctctgtgatcctcgtgggg
aatttgatgaagaagatatttttgggttctctacgtgcctccgagtttgagagtctgata
gacaggtcctggtatgctgtgctcgagacttttttgacctttgccattttcaaagataac
ttttcggacaagtttgtgggtttcttcagcatgttgctattcctcaaagtgtttcattgg
ctgggagaggtgcgagttaatttcatggagcagtctcccgcgaactctgccctctttcat
atccgagtcctttccctggccatgatcctggctttcctggatatgaagctcatacttcat
tcctacagctcgacgcagcaagatggagactctgttcagcttgtatttgggttcgagtat
gcagttcttctcactgtggtcatgaacttctttatcaagtacctcttacactgtgtagac
cttcgatcagagagtccatggcataacaagccaatctacatgctctatgcagagcttgtc
attggatttattaaagtcgttctctataccctatttattcttatcacgctcagaatctac
accatacccctcttcgctatccgacccatgtatcttaatctcagagctctcaaaaaaaca
tttgttggcattgtttcctcatatcaagctatttacatcatggatgctcactactctcaa
gctacacctgaacaacttgcttctgctgataatatttgcaccatttgtagagatgaaatg
ctggctcaggccactaaaatccttccttgtaatcatatatttcacaagtcatgcttgagg
tcttggtttcaaagacagcagacctgtcccacttgtcgtcatgacgttattcaaagcttc
cggcgtcaacggcatactcaacccactcccacgaataataataatgtacatgccaataac
aacaacatccctgcacagcaacctacacccctgggacaggcggctcagcagcctcttcat
caacaaattcagattcctcaatttcctggatttaatccaaatatattcgcccaaatggcg
gcagcggccaatataccacagcaattcccctttcctcccccagttcctcaacctacaaca
gcaactggacaacaaaacaatgcatcagcctcctcaaccactccaaccagtggcaacaac
aacaccgctacatcttcgacggattcatcacttcctccaaccccttcccagttcaactta
cccttcccctttccacccccaccccctttcccttctatgttttcctcattcagacctcca
cctatgcctccagcggattttaggggtctttcagatgaagaattgagagctatggagggg
aatgaacgcaaaaatgtagaggctcgaattgaatgcttgaagaacattcaagtattgctg
gatgctgctatgttagaaatgcaacaatattcctcaattctctctaaagtggatgatgtc
tctaacaatttcccattgccaacggctgagacgggagcgagacctaaagaatcaactcat
aacaagactcctgctgagactggtgacgaaaaggaaatcattgataaaatggatagtaat
tctagtccctctccatcatctactgaatcctctgacaaagaagaggtcagaagaagaaga
ttagaaaaatttaccaacatacccagcgattcatcctcttaa
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