Lepeophtheirus salmonis (salmon louse): 121115004
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Entry
121115004 CDS
T08214
Symbol
Ranbp21
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121115004 (Ranbp21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsm03016
]
121115004 (Ranbp21)
03036 Chromosome and associated proteins [BR:
lsm03036
]
121115004 (Ranbp21)
Transfer RNA biogenesis [BR:
lsm03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121115004 (Ranbp21)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
121115004 (Ranbp21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
UFL1
Motif
Other DBs
NCBI-GeneID:
121115004
NCBI-ProteinID:
XP_040565076
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All DBs
Position
3:36095876..36099928
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AA seq
1169 aa
AA seq
DB search
MSHEDVSSACLALAQAAELVTDPKTSREDRLRAYQECESFKDRSPIAAECGFALASDTSK
SLVVRICGLKILEDSIKSRWNDFNPQVKLSLKENLMNMIRSSMGDVLSEPIHIKDGISRC
IVEIIKREWPQHWPTLLAELNGCCVSEIGTEISLFVILRLVEDIAVLQNLEQTQRRKEIY
TALTQQLGDIFAFLMSLLERHYKAYLESTEILARKRQVKVCSAALGTFNAFVEWVPVSYV
MANDKYLIRCLCHLLMDESLQLNAGECLLNIVSIKCVKNQDRLQFLSFFETDMITQLFSA
TEAAEQKSSSDDVHYVFLKKMVLILVELGNQLCGLWSIIEKHTQRPSNFDVYLNAILFFT
RHPSLTVNFYVNELWIKFFRHTEILKDDIFKDFVPKWAEIVLKKTVKLGYRNEGFSILDF
ETEEEYGTFFGKYRIIILEGVKLVCCNYSPTLVYDHIEEWLSSLLRSQILNESLYLQIEA
VSLILDPVLSKSNLSPILARALHLLKSILEYETSDPILSSNLLSCVSASFVLVAHDSTLL
PIIMNKIFSCITFTERGTSNGHQISQVVKTLRRHGCSLLVKIATKFASTLHPIFDHLKDT
IATLRETEKINKMEFSCLVEALVLVSNEFKNYSIQANFVENVSAFPFEEFKSLQENLSSA
ETFVEYIGLTKVNDVKVDKLAQDPYYVNRSKISFCTTFLLSVCRRTKVPSDINECHSGGF
ILHEEPCGSGSFNVRNPAASVANAALPLFLSLARVINSLWTPENISKYGYSRTLEMIDTE
KLTVTGSTNVDSSTGLKEKKTSSRDKMKSFIYETYENIFHFLYECCSSFGSEFYRLPGLT
EALKSYLFAGIHNVPDYRLRCLVKTFMKSFINKCSKSSFSDVLGPILLDFCPYMLTRLTE
RWKYIESIVISDDDAVNDNEKDSKEVLEDVFLRQLTRDYLNAVKVLFMSGNGNDVVVNPT
TEDQSALSELGKLVLDYDTLRECLLVTLLRALVWNDSLSSVRACNLIKVILPYVILSKKL
NEDGARQIMISILSAFHALGQHEMNNIALTQLAIQAYEWMRSGYPSVLSVLSQVPGCNQE
DLKRFDDRIVVAINGKDVGKVSDRVKKDMFKKIINQFVGKDKAQLFKKEVIIKNLPSFIP
PKIRHKNLSLDETETNDISLTTLFNNGTK
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatgaagacgtgagttctgcttgcttggctcttgctcaagctgctgagttagtc
acagatcctaaaacatcaagagaggatcgactaagagcgtatcaagaatgtgaatccttt
aaagataggtctcccattgctgcggaatgtggatttgctttggcatccgacacttcaaag
tctcttgttgtacgtatttgcggtttaaagatccttgaggattccattaagtcccgctgg
aatgacttcaacccccaagtcaaattgtctctcaaggaaaatttgatgaacatgattcga
agttccatgggtgatgttctgagtgaacctatccatattaaggatggaatctctcgttgc
attgtggaaattatcaaaagggagtggcctcaacattggcctactcttttggctgaatta
aatgggtgttgtgtatcagaaattggtaccgagatcagtctatttgtcattcttcgcctg
gttgaggatattgccgttttacaaaatttagaacaaactcagcgaagaaaagaaatttat
acagctcttacgcaacagctaggagatatttttgcttttttaatgagtctcttggaacgt
cattacaaggcctatctggaatcaaccgaaatcttagctagaaagcgtcaagtcaaggtt
tgctctgctgctctaggaacctttaatgcatttgtcgaatgggttcctgtatcctatgta
atggcaaacgacaagtacttaatacgctgtctttgtcatcttctcatggacgagtcttta
cagctcaatgctggagaatgtttactcaatattgtctcgattaaatgtgtcaagaatcaa
gaccgtctgcaatttttgtccttctttgaaactgatatgattactcagcttttttctgcc
acagaagctgctgaacaaaaatcatcttcagatgatgtacactatgtattcttaaagaag
atggtgttgatacttgtcgagctgggtaatcaactctgtgggttgtggtcaatcatagaa
aagcatactcaaagaccctcaaactttgacgtttatttgaatgccatccttttttttact
cgccatcctagcctaactgttaatttctatgtgaacgagttatggattaagttctttagg
cacacagaaatattgaaggatgatatttttaaagattttgttcctaaatgggctgaaatt
gttcttaaaaagactgttaaactgggatatagaaatgaaggtttttcaattttagatttt
gaaactgaagaggaatatggaacattctttggaaaatatcgtatcattatccttgaaggt
gttaaacttgtgtgttgtaattattcccctacattggtctatgatcatattgaagaatgg
ctttcatcattattgagaagccaaatcctaaacgaatctttgtacttgcaaatagaagca
gttagtctaatattggatcctgtattatccaaaagtaatttatcacccattcttgctcga
gctttgcatctacttaagtctatattggaatatgagacatctgatcctattctttcatca
aatttattatcatgtgtgagtgcatcattcgttttggttgcccacgattccacccttcta
cccataatcatgaacaaaatattttcctgcattacgtttactgaaagaggaacatctaat
ggacatcaaatatctcaagttgttaaaacactaagacgccatggttgctctcttctagta
aaaatcgctactaaattcgcgagcactcttcatccaatttttgatcatcttaaagacaca
attgcaacacttcgagagactgaaaaaataaacaaaatggagttctcgtgccttgttgaa
gcactggtcttggtgtctaacgagtttaaaaattattcaatacaagcaaattttgtggaa
aatgtttctgcttttcctttcgaagagtttaaaagtcttcaagaaaatttatcttcggct
gaaacttttgttgaatacattggattaacaaaagtgaatgatgttaaagttgataaatta
gctcaagatccttactatgttaatcgctcaaaaatttcattttgcacaacattcttgtta
tcagtttgccgaaggactaaagtaccttcagatataaatgaatgtcactcgggtggattc
attttacatgaagaaccctgtggtagtggttcatttaatgtgcgtaatcctgcggcaagt
gttgccaatgctgcgttgcctttgtttttatcattggcaagggttattaattcattatgg
actccagaaaatatttcaaaatacggctactctcgcactcttgaaatgatagatactgaa
aagttaacagtaactggatcaactaatgttgacagttctactggtctcaaagagaagaaa
acctcttcccgtgataaaatgaaaagctttatttatgaaacttacgaaaatatatttcac
tttttgtatgagtgttgctctagttttggatcagaattttatcgtttacctggacttaca
gaggcattaaagtcgtacttatttgctggaatccacaatgttcctgactatcgtttaagg
tgccttgtaaaaacgttcatgaaatctttcatcaacaaatgttcaaaaagttcgttttct
gatgtgcttggacctatacttttagatttctgtccttatatgctaactcgactcaccgaa
cgttggaagtacattgagtctattgttataagcgacgacgatgcagtgaatgataatgaa
aaggattctaaagaagtattagaagatgtttttctgcgccagctcactagagactattta
aatgcagttaaagttctgttcatgtcaggaaatggaaatgatgttgtagttaatcccaca
acagaagaccaatcagctctaagtgaacttggaaaacttgttttagattatgataccctt
agagagtgtttattggttactcttctcagagccttagtttggaatgactcactgtcttct
gtcagagcatgcaatttaatcaaagtaatactgccttatgtaatcctttcgaaaaagttg
aatgaagacggtgccagacaaataatgataagtatattatctgcattccatgccctcggg
caacatgaaatgaataatatagctctgacacaattagcaatccaagcatatgaatggatg
aggtctggctacccctctgttcttagtgtactttctcaagttcctggttgtaatcaggaa
gatttaaaacgattcgatgatagaatagtggtagctatcaatggaaaagatgtaggcaag
gtgagtgatcgcgtcaagaaagatatgtttaaaaagatcattaaccaatttgtgggcaaa
gataaagctcaactatttaagaaagaagttattatcaaaaatttaccttcatttatccca
cctaaaattcgtcataaaaacctaagtttagatgaaacagaaacaaacgatataagtcta
actaccctattcaataatggaactaaataa
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integrated database retrieval system