Lepeophtheirus salmonis (salmon louse): 121115012
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Entry
121115012 CDS
T08214
Name
(RefSeq) steroid hormone receptor ERR2-like isoform X1
KO
K08703
estrogen-related receptor ERR
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121115012
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lsm03310
]
121115012
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
121115012
Nuclear receptors [BR:
lsm03310
]
3. Estrogen like
3B. Estrogen-related receptor
121115012
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121115012
NCBI-ProteinID:
XP_040565085
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Position
3:36246377..36259330
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AA seq
596 aa
AA seq
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MSRIIVMKIGQFGELWKIFDKVSPNGVSIEDNNSENNNNLSKNLLLDSTDLSLHKSSPGG
SSGGGKLLQQLLDTDPESSSERVHKGNKIGIALKNKILSSSVGEDVLNSPPSPLDSLKGK
NVCSPSTSVSTSFNRNDTSNNNDTITSSSEEQDSIYLLNIIKDEAAPSYEDNEILYSLSN
SSTMTLLQNNEMEIADSCEVNANSPTTSMKDSDVHSSRDPLNTQLNVTTTTNIASYAPPG
SPDHHLCSSTSETNLFSRDIIKEEEGQRRTCLVCGDIASGFHYGVSSCEACKAFFKRTIQ
GNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESS
PYIQPPPKKTLEDNKLLQVLRHCEPEAFLVNMDMTLPNYKIRTISTLSDFYNRELIGTIE
WAKQIPGFSNLTINDQMKLLQSSWSEILVLSLVYRSLPYNGKISLTNNFSLDESQARLCG
LSEFFFQCLRILERVEHFGLRKEEYIIMKAIIIANCDIQLENYSSLLKLKNNLLSALYDT
TAILRSGNPSINVQNTLLLLPSIRQADILIHQFWDLIRTEGKISLNRLLVEMLDAQ
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaatcattgtaatgaaaataggacagttcggtgagctctggaagatctttgac
aaagtttctcccaacggagtttccatcgaggacaacaactctgagaataataataacctt
tctaagaaccttcttttggattccacagacttgtctctacataaatcttctccaggaggg
agcagtggcggtggaaagctgctgcaacaattgttggacactgatccagagagttcctcc
gagagggttcataagggtaataaaataggaatcgctctaaaaaacaagattctctcctct
tcagttggagaagatgtgttgaattccccaccgtctcctttggactccttaaagggcaaa
aatgtgtgttctcccagtacgagcgtttctacctctttcaatagaaatgatactagcaat
aacaacgacacaataacgagttcctcagaggaacaagattcgatttacctcttaaatatc
atcaaggatgaggctgctccttcctatgaggataatgaaatattatattctctcagcaat
agtagtactatgacattacttcagaataacgagatggagatagctgatagctgtgaagtg
aatgctaattcgccaacgacatccatgaaggactcagatgttcactcttcaagagatccc
ttaaatactcaactcaatgtaaccacaacaacaaatatagcgtcttatgctcctcctggt
agtccagaccatcatctctgttcttcaacatctgaaactaatttattttctcgagatatt
ataaaagaggaagagggacaaagaagaacgtgtttggtttgtggtgatattgcttctggc
tttcactacggcgtttcatcttgtgaggcgtgcaaggccttcttcaaacgaactattcaa
ggtaatattgagtatacgtgtccagcctcaaatgaatgcgaaatcaataaaaggagacgt
aaagcatgtcaagcctgtcgatttcaaaaatgtttaagaatgggaatgttaaaagaaggt
gttcgtcttgatcgagttaggggtggacgacaaaaatataggcgcatgattgaatccagt
ccttacattcaacctcctccaaagaaaacgctcgaagataacaaactactccaagtttta
cgacattgcgagccggaggcttttcttgtgaatatggatatgactctgccaaattacaaa
attagaaccatttcaacgttgtcagatttctataatcgcgagcttattgggacaatagaa
tgggctaaacaaattcctggtttttcaaatttaactataaacgatcaaatgaagttgctt
caatctagttggtctgaaattctcgtcctatctcttgtatatcgatccctaccatacaac
ggaaaaattagtcttactaataacttttcattggatgaatctcaagcacgactttgcggc
ctctcggagtttttctttcaatgtttacgtattttggaacgagtggaacattttggactc
cggaaagaagagtatattataatgaaggccattatcatagcaaactgtgatatacaactt
gaaaactattcttcactcctcaaattaaaaaataacttgttatctgcgttatatgataca
actgcaatcttaaggtctggaaacccaagtatcaatgtacaaaatacactccttctactg
ccaagtatcaggcaggctgacatattgatacaccaattttgggatttaattaggactgag
gggaaaatatctctcaatagacttttagttgaaatgttggacgcacaataa
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