Lepeophtheirus salmonis (salmon louse): 121115022
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Entry
121115022 CDS
T08214
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121115022
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Meiosis-specific proteins
Others
121115022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
ISD11
ATPase_2
AAA_14
AAA_27
SMC_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
121115022
NCBI-ProteinID:
XP_071743478
LinkDB
All DBs
Position
3:complement(37717134..37725865)
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AA seq
836 aa
AA seq
DB search
MNMTVLLYFQIFPPFLHKMASSQEDINNLTRFRNEISLIRVDEHEESALNSRSTSVNISR
FVGLRIGCIIEGRGGAKGEIGIASISTSIPILVLSQITDSASYVKTLSKLIPLDLDELVV
PIGLDDGNLLDDINSVLPDTTIVRVHRKYYKQSNGLNYIKRIASLECSSIELRIQNQHYC
LAAASALLDYLTINMNIFYAPNSVFVEYQGPEDSILIDYDTAKNIELLKPNLTCDSKRSN
SLFGILNNCSTPGGTRLLRSNLFQPPIPRHKIEERHLAIQELLTDNNICSSLMSIFRSIG
DLEKTLSPFMFHYPKKETLWVLEKRLMNVISLKHILNVVPRINETIVSLKSPIFRDLQNM
LDDSALKVMAEKMNLIVENSIRHQNGLLKSQHSFAIKSGLNAYFDLSRDVYSEIVNELVE
VAERMTKAYDMPIRLKLNSVRGFHLFVVFNKKSPSNPKVETLPSEFILKKSCQNGIIFTT
EDTLRLNSKSQEALRVTNLIANKIINKLLEELKTNVSVLHKLSEQLNYIDMILSLSITSG
SQGFIKPDIANYTAVRNARHPILYLSGNIASKNIVPNSIYHNIESNFIVITGPNMSGKST
YLREIILLQILFQIGCFVPADNATFKIMSAIYTRFGTYDNMESNTSTFTREMKDMSYIFS
STENNTASTLVLMDELGRSTNNFEGASLCWAMSEELILRSHVTCFLVTHFKQLPRLENYY
PTVTNYHFLKEMGKTFMLVKGINIDEINYGIKFSKECGLCPNIVERAEEILQSMQEEDKL
IPLMSEDDMERLNYINLGFLAYKMILDHYQSAEIPQQDIREHFEKLRSQFVDIDEE
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgactgtattattatattttcaaatattcccgcccttcttgcacaaaatggct
tcttcgcaggaagatataaataatttaactcgatttcggaatgaaatatccttgatacgt
gtcgatgaacacgaagaatctgctcttaactctcgatctacctctgtcaatatttcaaga
tttgttggattgagaattggatgtattattgaagggcgtggaggagcaaaaggagaaata
ggaatagcatctatttccacttcaataccgatacttgttctaagtcaaataactgactct
gcatcttatgttaaaacattgagtaaacttattcctcttgatcttgatgaacttgttgta
cccataggtttagatgatggaaacttacttgatgatattaatagtgtgttaccagacacg
acaattgtacgagttcatagaaaatattacaaacaatcaaatggattgaattacatcaaa
cggatagcttctttagaatgctcaagtattgaattaagaattcaaaaccaacattactgt
ctcgcagccgcttctgctttactcgattatctcaccatcaatatgaatatattctatgct
ccgaattctgtttttgttgaatatcaaggacctgaagattcaattttgatcgattatgac
acagcaaaaaatatagagctattgaaacccaatttaacttgtgattccaaaagaagtaac
tcactatttggaattctgaataattgttcaactcctggaggaactcgccttctccgttca
aatctttttcaacctccaattcctcgacacaagatagaagaaagacatctagctatacaa
gagcttttgactgacaataatatttgcagctcattaatgtcaatttttcgaagtataggt
gatttagaaaaaacactttctccttttatgttccattacccgaaaaaagaaactctttgg
gtgttagaaaaaaggttaatgaatgttatttctttgaaacacatactgaatgttgttccc
agaataaatgaaacgattgtttcactcaaatctccaatatttagggatttacagaatatg
cttgatgatagtgcattaaaagtcatggcagaaaaaatgaatcttatagtagagaattcg
attcgtcatcaaaacggattgttgaaatctcaacattcttttgccattaaatctggattg
aatgcttattttgacttatctcgtgacgtgtacagtgagatagtgaatgaattggttgaa
gtggctgaaagaatgacgaaagcttatgatatgccaattcggttaaaattaaattctgtt
cgtggatttcatttgtttgttgtattcaataaaaaaagcccatcgaatccaaaagttgag
acacttccctcagaatttatattgaaaaagtcttgccaaaatggaatcattttcacaaca
gaagatactctcagactaaattcaaaatctcaagaagctcttcgagtaactaatctaata
gcaaataaaattattaataagctcttagaggaattaaaaacgaatgtttctgttctccat
aaattaagtgaacagttaaactatattgatatgattctatcgttatccataacctcagga
agtcagggatttataaaaccagacatagccaattatacggccgttaggaacgctcggcat
ccaattttatatctatcaggaaacatcgcttccaaaaacatagttcccaatagtatttac
cataatatcgaaagtaatttcattgtaataactggaccaaatatgtcagggaagagcaca
tatctccgggaaatcatattgctccaaattcttttccaaataggctgcttcgtacccgcc
gataatgctactttcaagattatgagtgcgatctacactcgtttcgggacatatgataac
atggagtcaaatacatcaacattcactagagaaatgaaagatatgagctacatcttctca
tcaactgagaataatactgcaagcactttagtattaatggatgaactcggtcgaagcaca
aacaattttgagggggcatctctgtgttgggcaatgtcggaagaactcattttacgaagc
catgttacctgtttccttgttacacactttaaacaattaccgcgattggagaattactat
cctactgttacaaactatcatttcttgaaagaaatgggtaaaacatttatgttggtaaaa
gggataaacattgacgaaataaattacggtatcaagttttcaaaagaatgtggtttgtgc
cctaacattgttgagagggctgaagagattttacaatctatgcaagaggaagataaattg
attccactcatgtctgaagatgatatggaaagattgaactatattaatcttggattttta
gcgtataaaatgatacttgaccactatcaatcggctgaaattccccaacaagacattaga
gaacattttgaaaaactaagaagtcaatttgttgatattgatgaagaataa
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