Lepeophtheirus salmonis (salmon louse): 121115099
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Entry
121115099 CDS
T08214
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121115099
03110 Chaperones and folding catalysts [BR:
lsm03110
]
121115099
Enzymes [BR:
lsm01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
121115099
Spliceosome [BR:
lsm03041
]
Complex C
Other components
PPlases
121115099
Chaperones and folding catalysts [BR:
lsm03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
121115099
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
WD40_Prp19
WD40
WDR55
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
VPS11_N
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
121115099
NCBI-ProteinID:
XP_040565195
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Position
3:complement(39947662..39953358)
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AA seq
636 aa
AA seq
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MSGDEKPLPSKRSAEEEDKKEGAEDDEDDWIGPLPSEASVKKRPKILEYEETYLKNLPCA
ESYEKSFMHRDSVLFTCVTASDFVITASVDGHVKFWKKHIYSIEFVKHFRAHLGSIADIS
VNNPSGTLLATISLQDEQCKVFDVVNFDMINMIRLNFKPSLVQWIHKTGDPLHLLAITER
QSNVIRIFDGNTPSPPLKTFDRIHFKTISAIAYSSPLDMIISGDSGGIIEYWTKEEGKLP
SNDIIDFDSKLDTDLYEFAKRKTYPLNICIASDGKSFASFGADRIVRVFKLSAGKLFLTI
DESLRHYINLQTTKKFLPPMEFNKKLSVEKDMEKSTDENLLRLNSIIFDKSGHFILYSSM
LGIKVVNIVTGKCVKVLGRSENVRFLNISLFQGIAKKTTEAAQTMETIASDNPALDAGLP
DPTLFVSANKKNRFYLFTRRAASSASNDGERDIFNEKPSKEDIIAASEDKGVPKLYTSAT
IHTSVGDIHIQLFAQECPKSVENFATHSKNGYYNGHIFHRVIKQFMIQTGDPTGIGTGGE
SIWGGEFEDEFNSKLKHDRPYTVSMANAGPNTNGSQFFMTVVPTPWLDNKHTVFGRVVRG
MEVAQNISNVKTHPKTDKPYNEITIISITVRDPLHF
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggagacgaaaagcctcttccctccaaaaggagcgctgaagaagaggacaaaaag
gagggtgcagaagatgatgaggatgactggattggtcctctaccgagtgaggcgtcagtg
aagaagcgtcccaaaatcttggaatatgaggaaacctacttgaagaatttaccttgtgca
gaatcttacgaaaagtccttcatgcatcgagattctgtccttttcacatgcgttacagcc
agtgattttgtgattacggcaagtgtggacggtcatgttaaattctggaagaaacacatt
tattccatcgaattcgtgaagcatttccgggcacatctcgggagtattgcagatatatcc
gtcaacaatccttcgggtactctcttagccacaatctcacttcaggatgaacaatgtaaa
gtctttgatgtcgttaattttgatatgattaacatgattcgtttgaactttaagccctcc
cttgttcaatggattcataagactggagatccacttcatcttttggccattacggaaagg
cagtctaatgtcattcggatatttgatggaaacactccaagtcccccgctcaaaacattt
gatcgcattcattttaagaccatatctgccattgcctactcatcgcctttggacatgatc
atttcgggggatagtgggggtattattgagtattggaccaaagaagaggggaaattaccg
tctaatgatatcatcgactttgattccaaactagatacggatttatatgaatttgctaaa
cgaaaaacatatccacttaatatttgtatagccagtgatggaaaatcctttgcatccttt
ggtgcagatagaatagttcgtgtatttaaactctctgccgggaaattattcttgaccatt
gatgaaagtcttcgacattacattaatttacaaacaactaaaaagtttctacctcctatg
gaattcaacaaaaaactctcagtagaaaaggatatggagaagagtactgacgagaattta
ttaagactcaactccattatttttgataagagtggacattttattctatattcgtccatg
cttggtatcaaggtcgttaacattgtgacggggaaatgtgtcaaagtattaggaagatct
gagaatgtgaggtttttgaatatatctctatttcaaggaatcgccaaaaagacaacagag
gctgcccaaactatggagaccattgcttcagacaatcctgcattggatgctggcctacct
gatcccactctatttgtctctgcaaataaaaaaaatcggttttacttattcacaaggcgg
gcagccagctctgcctccaatgacggagagcgggacatattcaatgaaaaaccttctaaa
gaggatatcatagcagcctcagaggataagggtgttcctaagctctatacttctgccacc
atccatacctcagttggggatattcatattcagttattcgctcaagagtgtccaaaatct
gtggaaaactttgccacgcactcaaaaaatgggtactacaatggccacatatttcatcgt
gtgatcaaacaattcatgattcaaactggtgatcccactggaataggaactggaggagaa
agcatttggggtggagagtttgaggatgagtttaattcaaaactcaaacatgacagaccc
tacactgtaagtatggctaatgcggggcctaatacaaatggtagccaattcttcatgaca
gttgttccaactccttggttagacaataagcacaccgtatttggaagagtagtgcgtgga
atggaagtagctcagaatatttctaatgtgaaaactcatccaaagacagacaaaccttac
aatgaaattactatcataagtattacagtgagggaccctcttcatttctaa
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