Lepeophtheirus salmonis (salmon louse): 121115127
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Entry
121115127 CDS
T08214
Symbol
mIF2
Name
(RefSeq) LOW QUALITY PROTEIN: translation initiation factor IF-2, mitochondrial
KO
K02519
translation initiation factor IF-2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lsm03012
]
121115127 (mIF2)
03029 Mitochondrial biogenesis [BR:
lsm03029
]
121115127 (mIF2)
Translation factors [BR:
lsm03012
]
Eukaryotic type
Initiation factors
MTIFs
121115127 (mIF2)
Prokaryotic type
121115127 (mIF2)
Mitochondrial biogenesis [BR:
lsm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
121115127 (mIF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
FeoB_N
Roc
SRPRB
Motif
Other DBs
NCBI-GeneID:
121115127
NCBI-ProteinID:
XP_040565243
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All DBs
Position
3:complement(41266965..41269439)
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AA seq
683 aa
AA seq
DB search
MLSRGGMIIRWISSGQPLCGGTRVRKSHMNYEKHMMKKTSKTQEIKRKSVTLWHSMNVNQ
LAKVLEVPSHSLFDLILDIPGSEFIHDEETPIQDSDIFAELAKKLHFKAKFVASSDSLSS
NPSSKIAELIPQPDNPTMYQPRSPVVAILGHIDHGKTTLLDYLRKSSVTDNEFGGITQHI
GAFSVPVPSFVQNTITFIDTPGHAAFKSMRNRGVCATDIAILVVDACEGVLEQTLESLSM
IKESGRPYIVAINKIDKPNADVNATKESLKELGKVNLEDFGGDVQSISMSALKGTNVDGF
LNAIGALAEVLELKGDPTGQVRGVILESQMEAGIGRSTVXLVQKGTLKKGDILVAETHYA
KIRTIKNEFGKSLNNAGPSQVVRISGWKSLPSAGDEVLQSSSEKKALDVVKTRNQVKMTE
KALMETMDIEKRRSIEREAYVQNRLETLKSGRIKSKKNYLKHMYSPSTGIPKLSILIKAD
VDGSLEAIMDCISTYDAHDLVKLDIIEFGVGEITDNDVNVAQEFDGIVYAFNVPVSKSIT
SIHLMDRIKTCNIIYKLMDDIRDEINVRMPLIDKEVEEGMATVLKEFIVTIDKKKSPVGG
CKVISGKIHRNSYFRIRRANSIIADKLKLKSLKHLKDEVPEISKGSECGLMFEDAGIRFQ
LSDRLECYKMTQERMKTDWNGGL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgctttctcgcggaggaatgattatccgatggatctcgagtggtcaaccgctctgtggt
gggacccgtgtacgaaaaagtcacatgaattatgagaaacacatgatgaaaaaaacttcc
aagacacaagagataaaaaggaagtctgttacactgtggcatagtatgaacgtcaatcaa
ttggcaaaagtactcgaagttccttcccattccttatttgacctcatcttggatatccct
ggatccgaattcatacatgatgaagaaacgcccattcaagactcggatatctttgcagaa
ctcgctaaaaaacttcattttaaagctaaattcgttgcttcgtcggactctttgtcttca
aatccatcctccaaaattgctgaacttattcctcaacccgataatcctacaatgtaccaa
ccacgaagtcctgtcgtcgctattttgggacatattgatcatggaaaaactacattgttg
gactatctgaggaaatcatctgtcactgataatgaatttggaggcattactcagcacatt
ggagcattttcagtccctgtcccttcttttgtacaaaatactattaccttcatcgacaca
cctggacatgctgcattcaaatccatgcgtaatcgaggtgtttgtgccacagatattgcc
attcttgttgtagatgcctgtgaaggcgtccttgaacaaacacttgagtctctaagtatg
atcaaagagtcggggagaccttacattgttgcaattaataaaatagataaacccaatgcg
gatgttaatgcaacaaaggaatcgttaaaggaattaggaaaagttaacttagaggatttt
ggcggtgatgttcagagtatttccatgtctgctctcaaagggactaacgtcgacggattt
ttgaatgctattggcgccttagctgaagttcttgaattaaagggggatccaactggtcaa
gtgcgaggtgtcatcttggagtcacaaatggaagctggtattgggcgctccactgttntt
cttgttcaaaaaggaactctaaaaaagggcgacatccttgtggctgaaacacactatgct
aaaattcgaacaattaaaaatgagtttggaaagtctctaaataatgcaggtccgtctcag
gttgtacgaatatcaggttggaagagcttaccttctgctggagatgaagttctgcagtca
tcgtcagagaagaaagcccttgatgtagtgaaaacaagaaaccaagtcaaaatgacggaa
aaagcattaatggaaactatggacatagagaaaagacgatcgattgaaagggaggcctac
gtgcaaaatcgcttagaaactttaaaatctggcagaattaagtcaaaaaagaattatttg
aaacatatgtatagcccatcaactgggattccaaagctgagtattcttataaaagctgat
gttgatggaagtttagaggccatcatggattgcatttcaacctatgatgcacacgattta
gtaaaacttgatattatagaattcggagtaggagaaatcacggataatgatgttaatgta
gcacaagaatttgatgggatagtgtatgcttttaatgttccagtcagtaagtctattacc
tccattcatttgatggatcggatcaagacctgtaatattatttataaactaatggatgat
attcgtgacgaaatcaatgttcgaatgcctttaattgacaaagaagtggaggaagggatg
gctaccgttctcaaagaattcattgttacaattgataaaaagaaatcaccagtagggggg
tgtaaggtcatatccggaaaaatccatcgaaattcatattttcgaattaggagagccaat
agtattattgcagacaagctcaaacttaagagtttgaagcatttaaaagatgaggttccc
gaaatttccaaaggctcagaatgtggattgatgtttgaagatgctggcatacgattccaa
ttatcagatcgcttagagtgctacaaaatgactcaggaacgaatgaaaacggattggaac
ggcggactttga
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