Lepeophtheirus salmonis (salmon louse): 121115145
Help
Entry
121115145 CDS
T08214
Symbol
rod
Name
(RefSeq) kinetochore-associated protein 1
KO
K11577
kinetochore-associated protein 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121115145 (rod)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
121115145 (rod)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rod_C
ARM_KNTC1_1st
ARM_KNTC1_3rd
KNTC1_N
ARM_KNTC1_2nd
Motif
Other DBs
NCBI-GeneID:
121115145
NCBI-ProteinID:
XP_040565262
LinkDB
All DBs
Position
3:42904552..42911061
Genome browser
AA seq
1967 aa
AA seq
DB search
MAWSRLLTSFYPEEETVNFGTRFAFESQEKLFDVVTQATIQGSDSFPSSIRTNTSDENLH
LSLDSALHVIRESNPLSFRLTASITFLLESPCSNFLLVGLQNEIRLLHLKTGSFLPPIHT
HCPSALIGALFQSNSLLLFNEASSLIAIKKINFSLINESLLNADINALKKLQADLIVEKP
IPLSQDFGTCIRGTYFYGDHTLAKLDITQLPSMKSITANIDDITIGRVCVPLTQPDIMLI
LDKVNGHLYVVCSLTLVLLKSWTIEPLNNIVLLEESSEEAELKIIMITRRETLQIREFPS
FELMYELEVHSVCHLIESHSNQETPFFLEGSEKGSELCLRLRGIVEASPEARLNRLLRRN
KFDEALGFVKTFRLHPEEVYKAKTLWLLERLSPWNISIKLEDIEKDFNELKLCFNEIQDK
DFVVQTCIKAALPTIKSTKSLLIYAREMIRNNLNELPVDLLVFVSQTLQKIDTFRLLGGK
DVEEWMIFLNGKSYDIMLSYIKRKAISEAKLMWTRHLAEFTAIFDSESIIEILNEFKSYN
DAIILEWCEIFIPDCLKLVPESLPLISEWAYSIIISMESRRGRGWPHSGLNFSEKILKTM
TFMSDDDECSSEAQLILFQERSKSSSSLNKFIRLIDILKDLMILHNNYRLKIKLENFLED
DKIKVARILLDWTSPEEIPNLIHGYLNEYLQRGSSGKLNVSEVYENYLLDLIEDTSATWH
WNLGAAPWEEKVLALIPFIFSVEKKTLVILKSLKSAPVPWSQSMVDLCAMGSNISSSSYV
VAIKEQETLVSLKQILKRYHFRSYEISSKVQAEKMMKIILRKSGGSCEGHNDIKEICNVV
PFLEEHDATLAYIRFILQDNSESPMKEIIDLVSSENREFLCQKILSYAMVFEKYSTNENK
NIELQNYLSFLSFTIDETLPFSLREEFESFKKSFDLSRKLDIPRREHSEETLKDYITSNH
KVEVNELFRRIRWIGSSFNLNESTLLITLIEELIRNENIKDANTLISKISHRSFSMTTDI
ESLLKMIIHSCEFALSNHLDLIQNFKELVSVNLTFNEHGILDLCELSVWLRIILSVFSTR
NKNFLYSIHSFLYVDKGLPVALDGMRPFINAMKVLFPFGNIATSRYKPLCLLFQTKESSN
DSTADQTVLSYSHITKPSVEDNFEYQKKIEEMQSLMNLSIDVSNKNAQSLLSVIIYITYR
NNIKLLDSLMVDRMKINMGSMQNSLIESLFKKVMGERKKELDCSLALTCLINESEESSLN
ILSATNSSFTLDFTRSSVLARIGCNYSNLFCTAPIFEKYKSYLKNVIWAKKAVDLGVAPK
DAFIQYTRDTEKVINKLVKVTEVSIEDLVQFASSYELEVDEVLVLYAEEQLSKNCKSLIN
KMQEIINSMHNSSTVSTLLYEMWNAASSYNYEVLQFIICGLQSRASPNAAISKAAEVLEF
LKYYDRVSSPSESERSVWMTKYKVEFKKFPEDVANKRLPLTPLVTLPKKEKFNLLGKEFQ
LTNYKLWVSVAHVLNFNSDNILVKTIENAFEDMLNSSDHTKDGLSFDSNNEKLLEKIYEC
LNAMTDFFKATSCAYWILNKLPMGRDKVNTSKKYVLIAEKWKEVAEGTEDEARSISALEF
AIDGNLRVETEFILIKYGLSEQRYLDMVNEKAIDNLVLSLYEHDSIIKRSKTAGGDYPDI
NGAVEEIAKIQKISLMSLKYDMLTNWLPENKDLNYMDESLSLDFHQSSRRKNLKTDEKDK
DNYIRCVYISQCSELHHFLMSIALGKSTSMSSVHSTSHKLRALKCLLSVVDENAFEKLAI
TNYSELLELYSSLIFVSKLESLGLHYDLETYKSCDKKILIESILRSSGVTKEGLDLIVDL
SIFFSIFDSMLWDDLLKRLVQHSSSRLESVLLRLNHQPHLWHLENFLKAWNHLVLQPFIS
NENHSECDKALQLLNKCPLDLNVEELKGECIRLQFHDLAEKLSDIYL
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atggcttggagccgactcctcacctccttttacccagaggaagaaacagttaattttgga
actcgcttcgcttttgaatctcaggaaaagctcttcgatgtggtaacacaagccacgatc
caaggatccgactccttcccttcctccattcgaacaaacacttcggatgaaaacctgcat
ctctccctggattcagctcttcatgtgatacgagagtccaatcctttgtcttttcgactc
acggctagcatcactttccttttggaatccccttgctccaatttcctactcgtaggattg
caaaatgagattcgacttcttcatctcaaaacaggctctttcctccctccaatacacacc
cattgtccctccgccctcattggagccctttttcagtccaactcgcttcttctcttcaat
gaagcctcatccctcatagccattaagaaaatcaatttctctctcatcaacgagtctctt
ttaaatgcggatataaacgcactcaagaaattacaagcagatctcattgtagaaaaaccc
attcctctttctcaagactttggtacatgtattcgaggcacttatttttacggtgatcat
accttagcaaaactggatataactcaattaccatccatgaaaagcataactgcaaatata
gatgatataaccatcggaagagtgtgcgtacctctcactcagccagatattatgcttatt
ttagataaggtgaatggacatctctatgttgtttgctcactcactctggtattactcaag
tcttggaccattgagccattaaacaatattgtcttattggaagagtcatctgaagaggct
gagctcaaaatcataatgatcacgcgtagagaaacacttcaaatacgagagtttccttcc
tttgaattaatgtatgagttagaagtacactctgtctgtcatttaatcgaatcccattct
aatcaagagacacctttctttctggaaggatctgaaaaagggtcagaattgtgcttacgt
cttcgtggtattgtcgaagcatctccggaggctagattgaatagattgcttcgaagaaac
aaatttgatgaagcattagggtttgtaaaaacttttagactccatccagaagaagtatat
aaagctaaaaccctttggcttcttgaacgtttatctccttggaatatttcaatcaaactt
gaggatattgaaaaggacttcaacgaactcaaactttgttttaatgaaatacaagataag
gattttgtggttcaaacatgtataaaggctgcacttcctacgataaaaagtacaaagtct
cttcttatttatgcgagggaaatgatacgaaataatctcaatgaactccctgttgattta
ttagtttttgtgagtcaaactctccaaaaaattgatactttcagacttttaggaggcaag
gatgtcgaagaatggatgatattcttaaacggaaaatcatatgatatcatgttgtcgtac
attaaacgcaaggcaatatcagaagctaagttgatgtggacccgtcacttggctgaattt
actgctatatttgattcggaatccataattgagattttaaacgaatttaaaagttataat
gatgcaataattttggaatggtgtgaaatttttataccggactgtttaaaattagttccg
gaatccttgcccttaatatctgaatgggcttattcaatcattatttcaatggaatctcga
cggggtagaggatggcctcactctggtttgaatttttctgaaaaaatattgaaaactatg
acattcatgagtgatgatgacgaatgtagttctgaagctcaacttatattgtttcaggag
cgatccaagtcatcatcaagtctaaataaatttattagactaatagatatcttaaaggat
ttgatgatccttcataacaattatcgtctaaagataaagttagaaaactttttagaagat
gacaaaataaaagtagcgcggattttgctggattggacctcaccagaagaaattccaaac
ttgattcatggatacctaaacgaatatcttcagcgcggatcttcagggaaattgaacgta
tctgaggtctacgaaaattatttattggatctcattgaagatacgagtgcgacatggcac
tggaatcttggggctgctccatgggaggaaaaagtattggccttaattccttttattttt
tcagttgagaagaaaactctagtcatactcaaatcacttaaatctgcgccagttccctgg
agtcaatccatggtggatctttgtgccatgggttcaaatatatccagttcttcatatgtg
gttgctattaaagagcaagaaactttggtttcattaaaacaaattcttaagaggtaccat
tttagaagctatgaaatatcaagtaaagtgcaagcagagaagatgatgaaaattattttg
agaaaatctggtggatcatgtgaaggtcataatgatattaaagaaatatgcaatgtggtt
ccatttttggaagaacatgatgcaactcttgcttatatacgatttattttacaggacaat
tcagaaagtccaatgaaagaaatcattgacttagtttcttccgaaaatcgggaatttttg
tgtcaaaaaatactgagctacgcaatggtttttgaaaaatactctaccaatgaaaataaa
aacattgagctccaaaattatttatcctttttatcgtttacaatagatgaaactctgccc
ttctctctgagagaagaatttgaatcatttaaaaaatcctttgacctctcaagaaagtta
gatattcctagaagggaacattctgaagagactctcaaagattacattacttcaaatcat
aaggttgaggtaaacgaactcttccgtcgtatccgttggattggatcatcttttaattta
aacgaatcgaccttgcttatcactttaatcgaggaactaattagaaatgagaatatcaaa
gatgcaaatacattgatatcaaaaatttctcatagatccttttcaatgacaactgacatt
gaatctttattgaaaatgatcattcattcatgtgagtttgctttgtctaatcatttggat
ttgattcaaaattttaaagagcttgtatcagttaatctgacctttaatgaacatgggata
ctagatctatgtgagttatctgtttggttaaggattatactctcagttttttcaacgaga
aataaaaacttcctctatagcatccactcattcctttatgtggataaaggtttgcctgtt
gctctcgacggaatgagaccatttattaatgcaatgaaagtattatttccatttggaaat
attgctacaagtcgctataagcccctctgtttactttttcaaactaaagagtcatcaaac
gactcaactgcagatcaaacagtattatcatattcacatataaccaaaccgtcagtcgaa
gacaactttgaatatcaaaaaaagatcgaggaaatgcagagtttaatgaatctttctatt
gatgtatcgaacaaaaatgcacaatcattactttctgttattatttatattacatacaga
aataatattaaactgcttgactcattgatggtggatagaatgaaaatcaatatgggttcg
atgcaaaactcactcattgaatccttatttaaaaaagtaatgggtgagagaaagaaagag
cttgattgttcattagctttaacatgtttaataaatgaatcagaagagtccagtcttaat
attttgtcagcaacaaattcatcatttacattggatttcactcgaagctccgtccttgcc
cgtattggttgcaactattccaacttgttttgtactgcgccaatctttgaaaagtataaa
agttatttgaagaatgttatttgggcaaaaaaagctgttgatctaggagttgctccaaag
gatgcctttatccaatatactcgcgatactgaaaaggttataaataaattagtcaaagtg
actgaagtctcaatagaagatcttgttcagtttgcctcttcttatgaactggaagttgat
gaagttctcgttttatatgctgaggagcaactttccaaaaactgcaaatcactcataaat
aaaatgcaggaaatcattaactcaatgcataatagttctaccgtaagtacactcctttac
gagatgtggaatgcggccagttcctacaactatgaagttttacaatttattatttgtggg
ttacagtcaagggcatcaccaaatgcagctatttcaaaagcagctgaagttctagaattt
ttaaaatactatgatcgtgtaagttctccatccgagtcagagcgctccgtttggatgaca
aaatataaagttgaatttaaaaaatttccagaagacgttgcgaataaacgtctcccatta
actcctctcgttacgttaccgaagaaagaaaaattcaatcttttggggaaagagtttcaa
ctcactaactacaaactatgggttagtgtagcacatgtattaaatttcaattctgataat
atactcgtgaaaacaatcgaaaatgcatttgaagacatgctcaactcttcagatcatact
aaagatgggttgagttttgattccaataatgaaaaacttttggagaaaatatacgaatgt
cttaatgctatgacggacttttttaaggcaacttcgtgtgcttactggatcctaaataaa
ttacctatgggtagagataaggtgaatacatccaagaaatatgttttgatagctgaaaaa
tggaaagaggttgctgaaggtacagaggatgaagcccgttctataagtgccttagaattt
gcaatagatggtaatttacgagttgagacagagtttattttaatcaagtacggattgtct
gagcaacgatatttagatatggtgaatgaaaaagccatagataatctggtattaagtcta
tatgaacatgattcaataattaagagaagtaaaacagctggtggagactatccagatatt
aatggtgctgttgaagaaattgcaaaaattcaaaagatttctcttatgtctctcaaatat
gacatgctaacaaactggttacctgaaaataaggacttaaactacatggatgaatcctta
agcctagattttcatcagagtagtagacgtaaaaatttaaaaactgatgagaaggacaag
gataactatataaggtgtgtgtatattagccaatgttctgagcttcaccattttttgatg
agcatagctcttggcaaatcgacaagtatgagtagtgttcatagtacaagtcacaaatta
agagctctgaaatgtttattgagtgtggttgacgagaacgcatttgagaaactcgctata
actaattatagcgagcttctagagctctactcaagtctaatttttgtgtccaagttggaa
tcattaggactccactatgatcttgaaacatataaatcctgcgataaaaaaatattgatt
gaaagtattctaaggagttctggtgttacgaaagaaggtctcgacttgattgttgatttg
agtattttcttttccatctttgattctatgctgtgggatgatttactcaaacgacttgtt
caacattcatcttccagattagaaagtgttttactcagattaaatcaccaaccccatctt
tggcatttagaaaactttttaaaggcatggaatcatctcgttctccaaccctttatatca
aacgagaatcattctgaatgtgacaaagctctacaacttttaaataaatgtccattggac
ttaaatgtagaagaattgaaaggagagtgcattcgacttcaatttcatgatttggctgag
aagctttctgatatatatttgtga
DBGET
integrated database retrieval system
