Lepeophtheirus salmonis (salmon louse): 121115166
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Entry
121115166 CDS
T08214
Symbol
Taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121115166 (Taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsm01002
]
121115166 (Taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121115166 (Taf2)
03036 Chromosome and associated proteins [BR:
lsm03036
]
121115166 (Taf2)
Peptidases and inhibitors [BR:
lsm01002
]
Metallo peptidases
Family M1
121115166 (Taf2)
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121115166 (Taf2)
Coactivators
SAGA/TFTC/STAGA complex
121115166 (Taf2)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
121115166 (Taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
121115166
NCBI-ProteinID:
XP_071743330
LinkDB
All DBs
Position
3:43801697..43805888
Genome browser
AA seq
1158 aa
AA seq
DB search
MSSAAKSKASNSIRHYKLIHQLISLTGINFSTKSIIGYVELTLKPSKENLKHIRLNAKQC
RVYRVCLNNELEAPFQYCDPILEVFEGDTPQKNLESFSEAHLSSCNLVDPDLNGGELNIR
IPSEAYQRGFVSSEKLLKVGIEFSLEEPQGGVHFVVPKDEMSYAHLFTCSYEESASRLWF
PCIDTLSELCTWKLEFTVDENMIAVASGDLTETVYTPDFKRKTFHYSLNVPTAAPNIALA
VGPFEIWVDPNMNEVTHFCLPHLLPVLKATVKNLHESIEYYETTLLTTFPYSCYKQVFVD
EAYSEVAAYSTMSIMSTTLLHSTAIIDQTYLTRRIGAEAVAAQFFGCFITTERWSDIWLN
KGISKYLMGLYIRKTFGNNEYRNMIHTQMDKVVNYEEKYGGIILDSSQPPAPPPVRGEQQ
REPTKEENQFVFQTTNVNTCSPEYMEMYALKAHLVVRMLANRIGDMQLIQVLNKQLSLAS
NAVAQSKQNVSSWSNMIINTLVFTRSIFTVTGKDMGVFMDQWVRTGGHARFHMEFVFNRK
RNTIEMQINQDAAHQGHRGIRRYVGQVTVAVQELDGWFSYTLAVENIHSKHDITCHSKSR
RNKKKKIPLQNNEEVDMDLSAMDDSPILWIRVDPDMQLIRSLDIRQPDFQWQYQLRHERD
VTAQSEAVISLENFPSNNTSKALRDIIEDEQCFYKVRCQSTHCLAKVANAMASSWEGPPP
MLLMFKKLYGSFAAGHIIKQNDFSNLQSYFLQKEIPVAMAKLRNAHRICPPEVLKFLLDL
FKYNDNSKNSHADNYYRAALVEALGHTVTPVVSVIENESAITAESLSPDTKLILEEITRF
LNLEKLLPCYKYTVTVSCLRAIRKLQKTGHLPPNPSLFRDYATYGQFIDIRICALECLVD
FTSLEGKSDDIDHLLKIIENDPVPFIRHKLCRLIVDNPFFERAKNHKNDRYQLVERLWSL
MNTKFWYDSRLRCDIVDIYFKLYGRKKPVCMPLPELQAILAPQRVQEDKTSKADKKKFHD
TKSRKKEVRPTRINVPYTHKERGRKTCDTGRPLLATADIPEYFNLDDPSSLPTTPIADDS
NGEPSHKPHKEKKKKKDKKRHKHKHKKHKHEHKSGSASKHKKQSAPGDTLGMNEASQGLS
SGSSSPSPSNSPDHDMTL
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgcagcgaaatccaaagcttctaactctattcggcactacaagctgatccat
cagttgatatccttgacaggaatcaacttttccacgaaatccataatcggctatgtggaa
ctcaccttaaagccaagcaaagagaatctcaagcatattcgtctgaatgccaaacaatgt
cgtgtgtaccgcgtttgcttaaacaatgaattggaggcgccttttcagtattgtgacccc
attttggaggtctttgaaggagacactccacagaaaaacttggagtctttcagcgaagct
catttgtcgagttgtaatttagtggatccggatttgaatggcggggagttgaatatccga
atcccgagtgaggcctatcaaagaggattcgtctcctcggaaaagctactcaaagttggg
attgagttctctcttgaagagccgcagggcggagttcattttgtagttcccaaggatgaa
atgtcctatgcacatttatttacttgttcgtatgaggagagtgcctcccgtctctggttt
ccctgcattgatacattgtctgagctgtgtacatggaagttggaatttacagtggatgaa
aacatgattgccgttgcatcaggggatttgacagagacagtttacactccggattttaaa
aggaagacttttcattattcccttaatgtacctacagctgctccaaatatcgcattggcg
gttggaccttttgaaatttgggtggatccaaatatgaatgaagtaactcacttttgcctt
cctcatctccttcctgttttgaaggcaacagtcaaaaatcttcatgagagtattgagtac
tacgaaacaacccttttgacaacatttccctattcctgctataagcaagtttttgttgat
gaggcatattcggaagtagctgcctacagtactatgtctattatgagtacgacactttta
cattctacggccatcattgaccaaacatatcttactcgaagaatcggagcagaagcagtt
gctgctcagttctttggttgttttataacaactgagagatggtcggatatttggctcaat
aaaggcatttctaagtatttaatggggctttatattcgaaaaacgtttggaaataacgaa
taccgaaatatgattcatactcagatggacaaagtagtcaactatgaagaaaagtatgga
ggtataatcctggacagcagtcaacctcctgcaccacctcctgttcgaggtgaacagcag
agggaaccaactaaagaagaaaaccaatttgtatttcagacgacaaatgtcaatacatgt
tctccagaatatatggaaatgtacgctttaaaagctcatctagttgttagaatgttggct
aaccgtataggtgatatgcagcttattcaagttctgaacaaacaactttcattagcctct
aatgctgttgcccaatccaagcaaaatgtttcctcgtggagtaatatgatcattaatact
ctagtttttacacgctccattttcactgtgacgggtaaggacatgggagtattcatggac
caatgggtgcgtaccggagggcatgccagatttcatatggagttcgtttttaatcgtaaa
aggaatacaattgagatgcagataaatcaagatgctgcccatcaaggacatagaggaata
cgtagatatgttggtcaggttacagttgctgtacaagagttggacggttggtttagttat
actctagctgtagaaaatattcactccaaacatgatataacttgccattctaaatcgcgt
cgaaataaaaagaaaaaaattcctctacaaaataatgaggaagtcgacatggatctctca
gcaatggatgattctcctattctatggattcgtgttgatccagatatgcaacttattcgt
tcattggatattcgtcagccagatttccaatggcaatatcagcttcgacatgaacgtgac
gtaactgcccaaagtgaagcagtaatttctttggaaaatttcccctccaataatacgagt
aaagcgttgagagatataattgaggacgagcaatgtttttataaagtacgatgtcaatca
actcattgtttagcaaaagtagcaaatgctatggcatctagttgggaaggtcctccaccc
atgcttctcatgtttaaaaagctttatggctcttttgcagctggtcacattataaagcaa
aatgacttctctaatcttcaaagttactttcttcaaaaagaaatccccgttgctatggct
aaacttagaaatgctcatagaatatgtcctcctgaagttttgaaattccttttggatttg
ttcaagtataatgataattcaaagaactctcatgcagataactactaccgcgctgcattg
gtcgaggccctcgggcatactgttacacctgtagtatctgtcattgaaaatgaaagcgcc
attactgctgaatctttatctcctgatactaaacttattcttgaggaaataactagattt
cttaatttggaaaaattgcttccctgttacaagtatactgtcacggtatcttgccttaga
gcgataagaaagttacagaaaacagggcatttgccaccaaatccttcactatttagagac
tatgccacttatggccaatttattgatatacggatatgtgcccttgaatgtttagtggat
tttacgagtcttgaggggaagagtgatgacattgatcatttactgaagattattgaaaat
gatcctgtaccgtttattagacacaagttatgtcgacttatcgtggataatcccttcttt
gaaagagctaagaaccataaaaatgatcgttatcaacttgtggaaagactctggagtctc
atgaatacaaagttttggtatgatagtagactacgctgtgatattgttgacatatatttc
aaactttatggaagaaaaaagccagtatgtatgccattgcctgaattacaagcaattcta
gcaccccaaagagttcaagaagacaaaactagcaaggcggataaaaaaaagtttcacgat
accaagagcagaaaaaaggaagtacgaccaactaggatcaatgtcccctatacacataaa
gaaagaggacgaaaaacctgtgatactggtaggcctttgcttgcaaccgcagatatccct
gaatatttcaacctggatgatccctcctcattacccactactcctatagctgacgacagt
aacggagaaccttctcacaaacctcacaaagagaagaaaaagaaaaaagacaagaaacgt
cacaaacacaagcataagaagcataaacatgaacacaagtcaggatccgcttccaagcac
aagaaacagtccgctcctggagacacattaggcatgaatgaggcttctcaaggtttgagc
tcgggtagttcgagtccaagtccttcgaatagtcctgatcatgacatgaccttgtaa
DBGET
integrated database retrieval system
