Lepeophtheirus salmonis (salmon louse): 121115255
Help
Entry
121115255 CDS
T08214
Name
(RefSeq) calpain-A
KO
K08585
calpain, invertebrate [EC:3.4.22.-]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsm01002
]
121115255
Peptidases and inhibitors [BR:
lsm01002
]
Cysteine peptidases
Family C2: calpain family
121115255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
DUF5625
Motif
Other DBs
NCBI-GeneID:
121115255
NCBI-ProteinID:
XP_040565392
LinkDB
All DBs
Position
3:48809824..48811782
Genome browser
AA seq
562 aa
AA seq
DB search
METQERLKHNTFNIGTKPRCSNSDQFDTLFDPKEYHKEDNESITDIGVPMEEDDSVDFRF
GGQDNHYAEQFYENIIIKLRKGNKLFVDPAFPPNDSSIFSELHNRRSYVQWMRASELSLN
PKFIQEGATRFDINQGRLGDCWFLAAVGNLTLKPKLFQNVVPMDQNFEDSQGMFRFRFYR
FGEWVEVVVDDYLPTLNGELIFMKSNSPNEYWSSLLEKAYAKLNGCYQSLSGGLINEAMV
DFTGGCPEHYDLMNLEQIPRDMFRIMRKAMKRNSLMGAGIMPNQNVYENKLDNGLVQGHA
YSMTGLTTVTASNKKVDLLRVRNPWGNFMEWKGAWSDHSQEWNTLANEDKERLNHDKDDD
GEFYISKEDFFSHFDFLEVCHLTEDSLDEKEIASGKLFWYKQEFHGSWNIGETAGGCANN
FRSFVKNPQFKLILTEKDSDSEDELEDVSTVIVSLMQKSYKRTGLVSIGFVIYKVSEDKE
LPLKMDDLISLPIVGFTQHYYNFREVNKRLKLKMGHYIIIPTTFESDIPGEFILRVFSEK
SSELQGSADYLPKEKPTLFNFV
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagacacaagagagattaaagcataacacttttaatattggaacaaagccccgctgt
tcaaattcagatcagtttgatactctattcgaccctaaagaatatcacaaggaggacaat
gaatccattacggacattggtgttcctatggaagaagatgattcagtagatttcagattt
ggtgggcaggataatcactatgctgagcaattttacgaaaatatcatcatcaaattgaga
aaagggaataagctctttgtggatccggcctttccgccaaatgattcttctattttttcg
gagttgcataatcgacgaagctatgtacaatggatgagggcgtctgaattatctttaaat
ccgaaatttattcaagaaggagccactcgatttgatataaatcaagggcgtctaggggat
tgctggttcctagcagccgttggaaaccttactctaaagcctaaattatttcaaaacgtt
gtaccaatggatcaaaactttgaagacagtcaagggatgttccgctttcgattttatcgt
tttggagaatgggttgaagtcgttgtggatgattatttgccaactttaaacggcgaatta
atattcatgaagtccaatagtccgaatgagtactggtcctcccttttggaaaaagcatat
gcaaaactgaatggatgttatcagtcccttagtggtggactcatcaatgaggccatggtt
gactttacaggaggttgtcctgagcattatgacttaatgaacctagaacaaatccctcgg
gacatgtttagaatcatgcgtaaagcgatgaaaagaaattcattaatgggtgctggaatc
atgccaaatcaaaatgtatatgaaaataaattggataatggtttggttcaaggacatgcc
tactctatgactggtcttacaaccgttacagcgtcaaataaaaaggtagatctcttgaga
gttagaaacccttggggaaattttatggaatggaaaggagcatggtcagatcattcacaa
gaatggaatactcttgccaatgaggataaggaaagattgaatcatgataaagatgatgat
ggggaattttatatatctaaggaggattttttcagtcattttgatttcttggaagtgtgt
catctaactgaggatagtttagatgaaaaggaaatagctagcggaaaattgttttggtat
aaacaggagtttcatggaagttggaatattggagaaacagcaggaggatgcgccaataat
tttaggagttttgtaaaaaatcctcaattcaaattgattttgacagaaaaagatagtgac
agtgaggatgagttggaagatgtgtccacggtcattgtttccttgatgcaaaaaagttat
aaaaggacagggctagtctccattggtttcgttatttataaagtgagtgaagataaggag
ctacctctaaaaatggacgatttgattagcttaccaatcgttggattcacacaacattac
tacaactttagagaagtaaacaagagattgaagttaaagatgggacattacatcattatt
ccaacaacttttgaatccgatattcccggtgaatttattcttcgtgtgttttctgaaaag
tcttcagagttacaaggatctgccgattatctaccaaaggagaaacctactttatttaat
tttgtttaa
DBGET
integrated database retrieval system
