Lepeophtheirus salmonis (salmon louse): 121115263
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Entry
121115263 CDS
T08214
Symbol
Rox8
Name
(RefSeq) nucleolysin TIAR
KO
K13201
nucleolysin TIA-1/TIAR
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121115263 (Rox8)
03041 Spliceosome [BR:
lsm03041
]
121115263 (Rox8)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121115263 (Rox8)
Spliceosome [BR:
lsm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121115263 (Rox8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
DUF4523
RRM_3
Nup35_RRM_2
Calcipressin
RRM_Nup35
DUF1866
Motif
Other DBs
NCBI-GeneID:
121115263
NCBI-ProteinID:
XP_040565401
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All DBs
Position
3:48905728..48910207
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AA seq
352 aa
AA seq
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MNLECLEDGPRTLYVGNLDVAVTEDLVLALFGQLGAVKGCKIIREGASDPYCFVEFAHPA
SAAAALTAMNKRICLGKEMKVNWASSPGGSSDSVVHHNLPKPDTSQHHHIFVGDLSPDIT
TETLKNAFVPFGEISDCKVVKDMLTNKSKGYGFVSFVEKNDAQTAIEQMNGQWLGSRAIR
TNWAARKPPAPYSKDTSNVNKLNFEDVYRQASPRNFTVYCGGLINSDENIIRQTFSPFGR
ILEIRYFRDKGYAFVRFDNKESACNAIVALHGSNVQGQSVKCSWGKESTETLGGGGGGGV
VATPPAPQQPNANPQQQQQQYYQPYYMYNPHYITQMQQYYGQYGYCLNGEQN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggaatgtttggaagatggtcctcggaccctgtacgtcgggaatttggatgtg
gcagttacggaagacctggttctggctctctttggccaattgggagccgtcaagggttgc
aaaatcatacgggaaggagcaagtgatccttattgtttcgtcgaattcgctcatccagca
tccgctgcggctgcactcactgcaatgaataaaaggatctgtttaggtaaagaaatgaaa
gtaaattgggcatcatctccaggtggaagctccgactccgtagttcatcataatctacca
aagcctgacacttctcagcatcaccacatctttgtaggagatctgagtcccgatattacg
acagaaaccttaaaaaacgcttttgttccattcggagaaatttctgactgcaaagtagtg
aaggatatgctaacaaataagtctaaaggctatggttttgtatcctttgtcgagaaaaat
gacgcccagactgctattgagcagatgaatggacaatggttaggaagtcgtgcaattcgc
acaaactgggcggctcggaagccccctgctccctacagtaaagatacgtcaaatgtgaat
aagttaaattttgaagatgtataccgtcaggcctcacctcgtaactttactgtttattgc
ggaggattgattaatagcgatgagaatatcatccggcagaccttttctccctttggacgt
atacttgagattcgatactttagagataaaggctacgctttcgtccgatttgataataag
gagtccgcatgtaatgcaatcgttgctctgcatggctcaaatgtgcaaggacaaagtgtt
aagtgttcctggggtaaagaatctacagaaactcttggagggggaggaggaggaggagta
gtagccacccctcccgcaccccaacaaccaaacgcaaacccacagcaacagcaacaacaa
tactatcaaccgtattatatgtataatccccactatattactcaaatgcaacagtactat
ggacaatatggatattgcttgaatggcgagcaaaattaa
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