Lepeophtheirus salmonis (salmon louse): 121115268
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Entry
121115268 CDS
T08214
Symbol
Ykt6
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04130
SNARE interactions in vesicular transport
lsm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121115268 (Ykt6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121115268 (Ykt6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121115268 (Ykt6)
Membrane trafficking [BR:
lsm04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
121115268 (Ykt6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
121115268
NCBI-ProteinID:
XP_040565409
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All DBs
Position
3:48987218..48990511
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AA seq
199 aa
AA seq
DB search
MTRLFSLLVLYKADSADVLKSAYDLSSFSFFQRSSVQEFITFTSKILAERTSNNSRQSVK
EAEYMCHVFVREDGLTAVCLSDYEYPTRVAHTLLTKILEDFSAQVPRSEWSGRKEVSGFN
GPLDVHLKKFQVPEQADSMSRLQNELDETKIILHGTIESVLDRGEKLDDLIQKSEGLSMH
SKAFYKSARKTNSCCSSWG
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggctattctcgttactagtcctttataaagccgatagtgctgatgtattaaaa
tccgcctacgatctctcaagttttagtttttttcaacgctcgtctgtccaagaattcatc
acatttacttcaaaaattcttgctgagcgtacttcgaacaattctcgccaatctgtcaaa
gaggctgaatatatgtgtcacgtattcgtaagagaagatggtctaactgcagtatgtctc
tcagactacgaatatcctacgcgtgtggcccatactctactaaccaaaattctcgaagat
ttttctgcccaagttccacgaagtgaatggtctggtcgcaaagaagtatccggatttaat
ggtcctttggacgttcacttgaaaaaattccaagttcctgagcaagccgactccatgtct
cgtcttcaaaacgaattggatgaaactaaaataattttgcatggcactattgagtccgta
ttggatcgaggagagaaattggatgatcttattcagaagagtgaaggactctcaatgcat
tccaaggctttctataagtctgccaggaagactaattcatgttgttcaagttggggataa
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