Lepeophtheirus salmonis (salmon louse): 121115304
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Entry
121115304 CDS
T08214
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121115304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121115304
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
121115304
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
121115304
NCBI-ProteinID:
XP_040565460
LinkDB
All DBs
Position
3:49796083..49799715
Genome browser
AA seq
970 aa
AA seq
DB search
MAVKAEFEALCQELNMDALSKRKAWEDYESIKENYSLEGNQMHWLACSLYVACRNMVHST
IGDPQGAMRITGNGLSLTRLLRASHLSLVQFFNKAKKWADMFNLKKELRYKIDRLERNFA
VSNVIFKKYQPIFVHLFKDPSVKKGGKKKSGLSPAEVFDFTWGLFVRVKADFPAISDDLV
NSYHLLLSCVDHIYGNALLSHKNNLLNPVFQSETTDILDSLCRTHEGILSEVKSIREHYW
KPHIKQFIQQKTLKGDPQTLSGLLDPGNYEHNSKAIRKEYEAYVLSIGEYDERVFLGENA
VNEAGTPTKCGNPDTGEPGEKIQMARRNLVRQFDGNSLIPNTPLSGKHYLKAKDQLKITP
VSTATYLVSRLNNLIGKREAEPSSKLLEFFKSCDNNPAETIAERVKRLGDIFSENYTARS
DKHPGSQGSFARMRLKMGVILYYKLLERILMSEKEKGKPIGNLLDQNQFHCALFACCLEV
VIFSYNSQRTFPWILDTFGLESIQFYKVIEIIIRNEDALPRDVVKHLQRIEEQILESRAW
VRDSALWEEIEKDGRGVPSCEEVALPNNEGSTSLIVDPIRSPMSNQKQVFAVIKSPMAVD
RFKSPVVNAIARRQLFLGSSSSPVNAGQSLLFNQEPLGNPSSDSVKKVILASPKITKVAE
RPKRTGSLGLFFRKVYHLSYLRLDQLCFSLQIADEDIKRKIWTTFEYTLKQNTDLMKDRH
LDQLLMCSLYIVCKVVGSTKYFTDIMKHYRTQPQAASHVYRSVLLRPRGMKGDVENESSD
AQKSITPPTPTRLAASSTIAEDGEERGDLIKFYNTVFMERLQEFSLKFKRSRQSEAPPLS
PLPKLRANPQSPCKKVSENQRIFIRPLKTGANEVVINNSPHKPLLYNFNRSPAKNLNAIN
ELMREVEKKSTRGKRLLAEEDVPSAKSSKLDSDQSPIKLQLLNEPPVPPPLGTGGVNNKL
ELILGDRSQM
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaaagcggagtttgaggctctttgccaggagttgaacatggatgcattgagt
aagcgtaaggcttgggaggactacgagtccatcaaggagaactattctctggaagggaat
cagatgcattggctggcttgctccctctacgtggcctgtcgcaacatggtgcactccacg
atcggagatccccaaggagccatgcggatcaccgggaacggtctctccctgacccgcctc
ctccgcgcctcgcatctgagcctcgttcagttcttcaacaaggccaagaagtgggcagac
atgttcaacctgaaaaaggaactccgctacaagatcgaccgcctggaaaggaactttgcc
gtctccaacgtgatcttcaaaaagtatcagcccattttcgtgcatctcttcaaagaccct
tctgtgaaaaaaggcggaaagaaaaagagtggactgagtccggccgaggtctttgacttt
acctggggtctctttgttcgtgtgaaagcggattttcctgctatctcagacgatctggtc
aactcctatcatcttcttctctcctgtgtggatcacatttatggaaacgcgcttctttcc
cacaaaaataatttgctgaatcccgtattccaatcagaaacgacagatattttagattct
ctttgtagaacgcacgaaggaattctttcagaagtcaagtccatacgggaacactattgg
aagcctcacatcaagcaattcattcaacaaaaaacactcaaaggagatccacaaaccctt
tctggtcttttagatccagggaattatgagcacaattccaaagccattcgtaaagagtat
gaggcttatgtattgagtattggggaatacgatgagcgtgttttcttgggagaaaatgct
gtcaatgaagccggaactcctacaaagtgtggaaatccggatacaggagaaccaggggaa
aagattcaaatggcgcggcggaatttagtgagacaatttgatggaaattcccttattcct
aatacacctctaagtggaaaacattatttaaaagctaaagatcaattaaaaataacgccg
gtctcgacagccacttacttagtgtccagacttaacaatctaattggaaagcgggaagct
gagcctagttcaaaattacttgaatttttcaagtcttgtgataataaccccgctgaaaca
attgctgaacgtgttaaaaggcttggggatatattttctgaaaattatactgcacgtagc
gataagcaccctggttcccaaggatcttttgcccgaatgcgtctaaaaatgggtgtaatt
ttatactataaacttctcgaaaggattcttatgtctgaaaaggaaaaggggaagcctatt
ggaaatctcttggatcaaaatcagttccattgcgcactctttgcgtgttgtcttgaagtt
gttattttttcttataactcgcaaagaacctttccttggatcctggatacatttggctta
gaatctattcagttttacaaagtcatcgaaataatcattcgcaacgaggatgcgcttcct
cgagatgttgttaagcacttgcaaagaatcgaggaacaaattttggagtcaagagcttgg
gtaagagatagtgcattatgggaagaaattgaaaaagatggaagaggtgttccttcctgt
gaagaagtggccttacctaataatgagggtagtacttcattaattgttgatcctattaga
tctcccatgtccaaccagaaacaagtttttgcagtgataaagtctcctatggctgtggat
cgcttcaaatctccagttgtaaatgctattgcgcgaaggcaattatttttaggttcttcc
tcatctcctgtgaatgcaggacaatctctcctctttaatcaagagccattaggaaatcca
tcttcagatagtgtcaaaaaagtcattcttgcaagtcctaaaattactaaagttgctgaa
aggcccaaaagaaccggatctctggggttattctttcgaaaagtctatcatctctcgtat
ctccgacttgatcagctctgtttttcattgcaaattgctgatgaggacattaaaagaaag
atctggaccactttcgaatacactcttaaacaaaacacggatctcatgaaagatagacat
ttggatcaactactgatgtgttccttatatatcgtttgcaaggttgtgggctcaactaaa
tattttacggatatcatgaaacattatcgtacacaaccccaagctgcgagtcatgtctat
cgaagcgttttgttgcgccctagaggaatgaagggagatgtggaaaacgaatcttctgat
gcacaaaagtccataacaccacccactccaacaaggttggccgcatcctcaaccattgca
gaagacggagaggaacgtggtgatttgatcaaattctacaataccgtcttcatggagaga
cttcaggagttttcccttaaatttaaacgaagtcgtcaatcagaagcacctcctttgtct
cctttacctaaattgcgtgccaatcctcagtctccttgtaaaaaggtctctgaaaatcaa
agaatttttatacgtccattaaagacaggagccaatgaagtagtaattaataattctcct
cataaaccccttttgtataatttcaataggagtcctgccaaaaatttaaatgcaatcaat
gaactcatgcgtgaggttgaaaagaagtctactcgtggtaaaagacttttagcagaagaa
gatgttccgtctgccaaatctagcaaattagattccgatcagtctcccataaaactccaa
ttattaaatgaacctccagtgccaccacctctagggaccggtggagttaacaataaactt
gaacttatacttggggatcgatcccaaatgtag
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