Lepeophtheirus salmonis (salmon louse): 121115608
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Entry
121115608 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-1
KO
K03347
cullin 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
lsm04141
Protein processing in endoplasmic reticulum
lsm04310
Wnt signaling pathway
lsm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121115608
04120 Ubiquitin mediated proteolysis
121115608
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121115608
04350 TGF-beta signaling pathway
121115608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121115608
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
121115608
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Phage_TAC_12
Motif
Other DBs
NCBI-GeneID:
121115608
NCBI-ProteinID:
XP_071743717
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Position
1:6978389..6982321
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AA seq
811 aa
AA seq
DB search
MNFLNIMASSSRTHGSGSKQIYDLDQIWGDLRAGIEQVFQRKDMSMMRYMELYTHVYNYC
TSVQQGSNSSSASGSRGPSSSGGSSGSGTKNKKSYSQGGGAQFVGLELYKRLKEYLKGYQ
VELLKNGVELMDEAVLKFYTAQWEEYQYSAKVLNGVCSYLNRHWVHRECEEGRKGIYQIY
QLALVTWRDNLFNHLHRQVASAVLKLIEKERNGETINTRLVSGVMNSSVELGLNEEDPTA
KGPNLSVYNEYFENQFLEDTERFYHRESTNFLRQNPVTEYMKKAETRIKEEERRVQIYLH
ETTLNRLLITCDRVLIEKHLEIFHLEFQNLLNAEKNDDLGRMYQLVSRIPYGLGELKNLL
ENHIYTQGLSAIEKLGAEALNDPKLYVSTILGVHHKYNALVLTSFNNDSGFVASLDKACG
KFINNNSVTKRTNSSSKSPELLAKYCDLLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKD
VFQKFYSKMLAKRLVQHMSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNER
FKWHLCKSNEPLDIDFQIQVLTNGSWPFQQSCSFSLTTELESCVTRFTSFYAGQHSGRKL
SWLFQMSKGELVTNCFKNRYTLQASTFQMAVLLQYNESDRWTLGQLAVSTQIKLDILTQV
LQILLKSKLLVIDNDGGEPSTVVSGGGAGGEEDGELALDVKTSISLFHGYRNKKLRVNIN
IPMKTEQRQEMELTHKHIEEDRRILIQAAIVRIMKTRKVLKHQQLMTEVINQLSSRFRPK
VPIIKKCIDMLIEKEYLERQDGNKDTYSYLA
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttaaatatcatggcttcttcatcaaggacacatggaagtggctctaaacag
atttatgacttggatcaaatttggggagatcttcgtgctggaatcgagcaagtttttcag
agaaaagatatgagtatgatgcgatatatggagctctatacgcatgtatataactattgt
acgagtgttcaacaaggatcgaattcttcatcggcctcaggatcacggggaccctcttct
tctggtgggagtagtggaagtggtacaaaaaacaagaaatcttattcacaaggaggggga
gctcagtttgttggattggagctttataagaggcttaaggaatatttgaaaggatatcaa
gtagaactactgaaaaatggagtagagcttatggatgaggctgtgctcaaattttacact
gcccaatgggaagaatatcagtacagcgcgaaagtattaaacggagtatgttcgtatcta
aacagacattgggttcatcgagaatgtgaggaaggccggaaaggaatatatcaaatctat
caactagctctcgttacatggagagataatttatttaaccatttgcatcgtcaagttgca
agtgcagttctgaaattaattgaaaaagaacgtaatggtgaaacaattaatactcggcta
gtctctggtgtcatgaacagttctgttgagttaggtcttaatgaggaggaccctacagcg
aaggggccaaatctatcagtatataatgaatattttgaaaatcaatttctcgaagacact
gagcgtttctatcatcgagagtcaacaaatttccttcgtcaaaatcctgtaacagaatat
atgaagaaagctgaaacgcgtattaaggaagaagaacgtagggtgcaaatatatctccac
gaaactactttgaaccgattgcttattacatgtgatcgtgttcttattgagaaacatctc
gaaatattccacttagaatttcaaaatctcttaaacgcagaaaaaaacgacgatttagga
cgtatgtatcaattagtctctcgaattccttatggacttggagaacttaaaaatcttctt
gaaaatcatatttatacacaaggattaagtgctattgaaaaattaggagcggaggccctt
aatgatccaaaactctatgtcagtactattcttggagtacatcataaatataacgcgtta
gttttaacctctttcaataacgattctggttttgttgcttcattggataaggcctgtggt
aaatttataaataacaattctgtgacaaaaagaacaaattcaagtagcaagtcgcctgaa
ctacttgctaagtactgtgatctattactgaaaaagagcagcaaaaatccagaagaggca
gaattagaagatactctcaatcaagtgatggtggttttcaaatatatagaagataaggac
gttttccaaaaattttatagcaaaatgttggctaagcgcctggtccaacatatgtcagca
agtgatgatgctgaagcttctatgatctcaaagttgaagcaagcttgtggctttgaatat
actagtaaattacagcgtatgtttcaagatataggtgtgtcaaaggacttaaatgaacgg
tttaagtggcacctatgcaagtcaaatgagcccttagatattgatttccagattcaggtt
ttaacgaatggctcatggccatttcaacaatcttgctcattttcattgaccacagagtta
gaatcgtgtgtaacacgatttacatctttttatgcaggccaacactctggcagaaagttg
agctggctttttcagatgtcaaaaggagaacttgtcactaattgttttaagaatcgttat
actcttcaagcatcgacatttcaaatggcagtacttcttcagtacaatgaatctgatcgt
tggactttaggtcaattagctgtatccacccaaattaaattggacattttgactcaagtt
ctccaaatattgctcaaatccaaacttttagtaattgataatgatggaggggaacccagt
actgtagttagtggaggtggtgcaggcggagaggaagacggagagcttgctttagatgtt
aagacatccatatctttatttcatggttatagaaataaaaaacttagagttaacattaat
attcctatgaaaactgaacaaagacaagagatggaattgacgcataagcatatcgaagag
gatagacgaattctcattcaggctgctatcgtgagaataatgaaaactcgtaaagtactg
aagcatcaacaattgatgacagaagtaatcaatcaactctcatcaagattcagaccaaag
gttccgatcatcaaaaaatgcattgatatgttgatagagaaagaatatttagaacgccaa
gacggaaataaagatacatatagctatctcgcttaa
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