Lepeophtheirus salmonis (salmon louse): 121115742
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Entry
121115742 CDS
T08214
Symbol
Ssrp
Name
(RefSeq) FACT complex subunit Ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121115742 (Ssrp)
03036 Chromosome and associated proteins [BR:
lsm03036
]
121115742 (Ssrp)
Transcription factors [BR:
lsm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
121115742 (Ssrp)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
121115742 (Ssrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121115742
NCBI-ProteinID:
XP_040565796
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Position
4:32769578..32773211
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AA seq
706 aa
AA seq
DB search
MDFLEYGDVKIESRGRMAEGRLKLTDEKITFKYAEKGKMETIPMESIELVNWQRMAGGWG
IRLFDKDGNLHRFAGFKDGERERLANFFSQTCKKDMLNRELSVKGWNWGTVNFDGSVLGF
EVGGKGDAFEIPLQYVNQCITGRNEVTLEFNLNEDAAVNLSELRFHIPTSENAGEDAIEN
FKEQVMKNASVVDSSGSAIAILQNVHCLSPRGRYDVKIYNTFLHLHGKTFDYKISMTTIT
RMFLLPHKDQRQRYFVVKLDPPIKQGQTRYHYLVLNFHEDEEEEVELPFTEEELKDRFDG
KLPKEVKGLTYEVLGTILKALINKKITMPGSFLGHSGTPVISCSHRAVSGFIYPLERGFM
FVYKPPIFLRYDEVRGVTFERSGGSTRSFDVSVNLKNNDIVYTFSSIEKGEYQKLYDYLK
SKNLNLKVSGKTNKSGIDWGDDRKVDHHLHNVIASANELSSELSSDDTDFNPDALEALSA
KEEYDSEPSTTSTEESDVEGTGPEADAKREEKRKKKELRRVEKESEKSKKPVSSKKKEGG
GSSGQRKKKTKLPGQPKRNQSAYFLWMNENREKIKSDFPGLSITEFGKKAGELWKDLKDK
TDWDAKAAEDKKRYDEDMRKWKSSSTYQEATSKSKSSKSSSSSSKKSPKKPAISVPQTGS
FKSKEFIEDSTDSSDNDNRKKKKKSKDGKNVSKSSSDEEMKSENSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggactttttggaatatggggatgtgaagatcgaatctcgcggtcgaatggcggaaggg
cgactcaagttgacggatgagaaaatcacgtttaaatatgcggagaagggtaaaatggag
acgatccccatggagagtattgaacttgtgaattggcaacgtatggctggtggctggggc
attcgtctgttcgataaggatgggaatctgcatcggtttgctggattcaaggatggagaa
cgagagcgtttggccaatttcttttctcaaacctgcaaaaaggacatgttgaatcgtgag
ctctctgtgaagggatggaattggggaacggtgaacttcgacggatctgttttaggattc
gaagtgggcggaaagggggatgcctttgaaatccctcttcaatatgtgaatcaatgcatt
actggacgtaatgaagtgacactggaattcaatttgaatgaagatgctgccgtcaatttg
agtgaacttcgttttcatatccctacctctgagaatgcgggagaagatgccatcgaaaac
tttaaggaacaagtaatgaagaatgcaagtgtggtggactcatctggctctgccattgcc
attcttcaaaacgtacattgtctctctcctcgtggtcgctatgacgttaaaatctataat
acatttcttcatcttcatggaaagacctttgattataaaatatcaatgacgacgatcaca
cgcatgttccttctgccgcacaaggatcaacggcaacgctacttcgttgttaaattggat
ccccctatcaaacaaggtcaaacacgctatcattaccttgttcttaactttcacgaagat
gaggaggaagaggtagagctccctttcacggaagaggagctcaaggatagatttgatgga
aaacttccaaaagaagtgaaaggtctaacctatgaggttttaggaaccattcttaaagcc
ttaatcaacaagaagattactatgccgggctcatttctgggacattctggaacacctgtt
atttcatgttcccacagagcagtctctggttttatttatcctctcgagcgtggatttatg
tttgtgtataagcctcctatttttcttcgttatgatgaagttcgtggtgttacatttgag
cgttcgggaggttccacgcgctcatttgatgtatctgtcaacctcaaaaacaatgatatt
gtctacacattctcttccattgaaaaaggcgaatatcaaaagctctatgactatttgaaa
tcaaagaatctaaaccttaaagtatcaggaaaaacaaataaatctggaattgattgggga
gatgatcgtaaagtggatcatcacttgcacaacgtcattgcatctgccaatgaactttct
tccgagctgtcctcagacgatacagactttaatccagatgccttagaagctcttagtgct
aaagaagagtatgactctgaaccttcaacgacctctactgaggagagtgacgttgaagga
acaggacctgaagcggatgctaaacgtgaggaaaaacgcaaaaagaaggaactaaggcgg
gttgaaaaagagagtgaaaaaagtaaaaagcctgtttcatccaagaagaaagaaggtgga
ggatccagtggacaaaggaaaaagaaaactaaattacccggacaacccaaaagaaatcaa
tctgcttatttcctttggatgaatgaaaatcgagagaaaattaaatcagattttccaggg
ctgagcattactgaattcggtaaaaaggctggagaactatggaaggatcttaaagacaaa
acggactgggatgcgaaagcagctgaagataaaaaaagatatgacgaagatatgaggaaa
tggaagagtagtagcacctaccaagaggccacatccaagagtaaatcatctaaatcatca
tcctcatcaagcaaaaagtcacctaaaaaaccagctatatctgttcctcaaactggatcc
ttcaaaagtaaagaatttatcgaagattctaccgattcttcagataatgataatcgaaaa
aagaaaaagaaatccaaagatgggaagaatgtatccaagagttcttcggatgaagaaatg
aagtctgaaaatagcgattaa
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