Lepeophtheirus salmonis (salmon louse): 121115781
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Entry
121115781 CDS
T08214
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121115781
04121 Ubiquitin system [BR:
lsm04121
]
121115781
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
121115781
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121115781
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
121115781
NCBI-ProteinID:
XP_040565848
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Position
4:33785862..33789554
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AA seq
602 aa
AA seq
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MSQSRKRSEIWTHFYCIDGSIAECCVCKTHISCRAGSTKRLHRHLRTAHPTVPLEKRSVE
PDVHEEDANVSSVSVDAPVPRASTESSIKHFFEHSLSPARQRKIDEELAKMIATDFQPFS
VVEDKGFRNFTHALNQVYVIPRRKALSQNMIPDLYYRERASVQERVNRATSVCLTTESWT
SRAMASFMSLTCHFIEDYKMASCLLDCFEFNDGHTSENLAEELLRVAKEWNVEKKVVACV
TDNATNILKAVKILKWTHHPCLAHTINMIVRNTLKVIQPAVDKVKAIVEFFHRSTTATQK
LESTQLQMGMPELKLKRDCVTRWNSTLNMIKRILESKHAVISTLAVINAPIDPLSQEEWA
VLQEACTVLEPFEQVTVEISTESYVTASKMLILCKGLQRVTAVNQTSVITANVQELVDIL
CATMDRKFNRMEYNIILSETTILDPRFKKLAFNDTKAFEEAVHRITITAARLSHPTTLPG
GQKGTQYEYERPHESDVWSLFKERVTEDSTRRNPSADPIMEVRSYLDEPLFQRSADPLNW
WESKASVYPRLTNLMTRRLCIVATSVPSERIFSKTGQIITDRRSQISPSKMRHLVFLNAN
LQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaagcaggaaaaggagcgaaatttggactcatttttattgtattgatggctcc
attgcagagtgctgtgtctgtaagacccacatttcatgtagagccggctcaaccaaaaga
ctccacaggcacctgagaactgcccacccgacagttccactggagaagcgatcagttgaa
cctgatgtccatgaggaagatgcaaatgtttcatctgtgagtgttgatgctccagtgcca
agagcatcaaccgagagctcaatcaaacactttttcgagcattctttgagcccggcaaga
cagagaaaaatagatgaagagttggctaaaatgattgcgacggatttccagccattttca
gttgtagaggacaagggcttcagaaactttacacatgcactcaatcaagtatatgtcatt
ccaaggcggaaagccctctctcagaatatgatcccagatctgtattaccgagaacgcgct
tcagtgcaagagagggtgaatagagccacatcggtttgtctaacaactgaaagctggaca
tcccgagccatggcctccttcatgtcacttacgtgtcactttattgaagactacaaaatg
gcgtcttgtcttctggattgttttgagttcaatgacggacacacctctgagaacttagcg
gaggagctgctcagagttgccaaagagtggaatgtggaaaagaaggtggttgcttgtgtt
actgacaatgcaacaaacatactcaaagcagttaaaatcctcaaatggacccatcaccca
tgtcttgcacacacgattaatatgattgtaagaaacactctgaaggtgatccagcccgct
gtggacaaagtcaaggcaatagttgaatttttccacaggagcacaacagccacacaaaag
ctcgaatcaacacaactacagatgggtatgcctgagctgaagctcaaacgagattgtgtg
acaaggtggaattccaccttgaacatgataaaacggattctggagtcaaaacatgcagtc
atttctacgctggctgttatcaatgcaccgatcgatcctctgagccaagaggaatgggcg
gtactgcaggaggcatgtactgttctggagccatttgagcaggtcacagttgagattagt
acagagagctatgttacagcctccaaaatgttaatcctgtgcaagggtctacagagagtg
acagctgtgaaccaaaccagtgtaatcactgcaaatgttcaagagctagtggatattctt
tgtgcaaccatggacagaaagttcaatcgaatggaatataacattattttgtcagaaaca
accattcttgatccgcgattcaagaagctggccttcaatgacactaaagcatttgaagaa
gctgttcatagaataactattacagcagcaaggttgagccacccaacaacactgccaggg
ggccaaaagggaactcaatatgagtatgagaggccacatgaatcagatgtttggagttta
ttcaaagaacgagtaactgaggactctacaagaaggaatccttcagcagatccaattatg
gaggtgagatcctaccttgacgagcccctttttcaaagaagtgctgacccactaaattgg
tgggaaagcaaggcttcagtctacccacgcctcacaaatctgatgacaaggagactgtgc
attgttgcaacatcagtaccctcagagagaatcttctctaaaacaggtcagataatcact
gatagaagaagccaaatcagtccttcaaagatgaggcacctggtgtttctaaatgctaat
cttcagtag
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