Lepeophtheirus salmonis (salmon louse): 121115812
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Entry
121115812 CDS
T08214
Name
(RefSeq) eukaryotic initiation factor 4A-I
KO
K03257
translation initiation factor 4A
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121115812
03012 Translation factors [BR:
lsm03012
]
121115812
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121115812
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121115812
mRNA cycle factors
Stress granule specific factors
121115812
Translation factors [BR:
lsm03012
]
Eukaryotic type
Initiation factors
eIF-4
121115812
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121115812
Exosomal proteins of bladder cancer cells
121115812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
AAA_30
AAA_22
CMS1
TniB
UvrD-helicase
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
121115812
NCBI-ProteinID:
XP_040565892
LinkDB
All DBs
Position
4:complement(35075427..35078761)
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AA seq
413 aa
AA seq
DB search
MSNSDRRSPVDENEREFSRPGADDGDTNDIIECNWFEICESFDDMNLKEDLLRGIYSFGF
EKPSAIQQRAIVPCIKTRDAIAQAQSGTGKTATFSIAILQKIDISMNRTQALILAPTREL
AQQIQKVVLSLGDFLKATCYACIGGRSISSDIRALEHGPHIVVGTPGRVFDMITREHLRT
ENIKMFVLDEADEMLSRGFKEQIYDVFRHLNQDIQVVLMSATMPDDVLDVTKRFMRDPIR
ILVRKEELTLEGILQFYVFVEKEEWKLSTLCDLYETLTITQAVIFCNTRRKVCWLTEKMG
LKHFTVSSMHGEMSQEEREVIMREFRSGSSRVLITTDLLARGIDVQQISLVINYDLPVNK
ENYIHRIGRGGRFGRKGVAINFITEGDRMALQDIEKHYHTQIEEMPKDVANLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcggacagaagatcccctgtggacgagaatgaacgagaatttagtcgtcct
ggtgcagatgatggcgacacaaacgacatcatcgagtgcaactggttcgagatttgcgaa
tcattcgacgatatgaatctaaaggaagatctccttcgtggcatttattcatttggtttt
gagaagccatctgcaattcaacaaagagcgattgttccatgcatcaaaacaagagatgca
attgctcaagcccaatcaggaacgggtaaaactgcgactttttcgatcgccatccttcag
aagatcgatatctccatgaataggactcaagctcttattttagctcctacccgagaattg
gctcaacaaattcaaaaagtggtcctctctcttggagattttttgaaggccacttgttat
gcctgcattggcggtcgttcaatctcgagtgacatccgtgctctggaacatggacctcat
atcgttgttggaacacctggaagagtattcgacatgattactcgagaacatcttcgtact
gaaaacatcaagatgttcgtcctcgatgaggccgatgagatgttaagtagaggatttaag
gagcaaatctatgacgttttccgtcatttaaaccaagatatccaagttgttcttatgtcg
gctaccatgcctgacgacgtcttggatgtcaccaaaagatttatgagagatcccattcga
atccttgtccgtaaagaggaattgaccttggaaggtattcttcagttctatgtgtttgta
gagaaggaagaatggaagctctcaactctctgcgatttgtatgagactctaaccattact
caagctgtcatcttttgtaatacccgcaggaaagtttgctggcttacagagaaaatgggt
ttaaaacactttactgtttcttccatgcacggtgaaatgtcacaagaggaacgtgaagtg
attatgcgtgaatttagaagtggatcgtcacgtgtattaatcactacagatttgttagct
cgtggtatcgatgtgcagcaaatttccttggttatcaattatgatttgcctgtcaacaag
gaaaactatattcacagaattggtcgtggtggccgtttcggtcgtaagggtgttgctatt
aactttatcacagaaggtgatagaatggctcttcaagatattgaaaaacattatcatacc
cagatcgaggagatgccgaaagatgtagcgaatcttatataa
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