Lepeophtheirus salmonis (salmon louse): 121115845
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Entry
121115845 CDS
T08214
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 2-like isoform X1
KO
K12326
Ras-specific guanine nucleotide-releasing factor 2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
RasGEF_N
PH
SOS1_NGEF_PH
PH_13
IQ
PH_11
Motif
Other DBs
NCBI-GeneID:
121115845
NCBI-ProteinID:
XP_071743967
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All DBs
Position
4:36689878..36770536
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AA seq
1655 aa
AA seq
DB search
MSSLMMSPKMQRIQRTVRINDGQLLGLAEKARYDSRLAGFLFKRCSDSSKWLLRWFRLYQ
NLLFYYDNENTVKPIGVIFLEGCYCESRLVSLSSKTEDTGEKLYCFAIMYRRENQRQYEL
RADSINECKSWIDAIKAASFNKLRFQMGELEQKHLHLLQVVESEKTAKWQYTQHCEELTE
EIKKLRNELFSLKKEWRLLPQMSKTSSQEGRSSGNSSVEEEDPDLAKIKKVQSFFRGWLC
RRRWKQIVDEYIRSPHAESMRKRNCLVFRMVEAEEEYVEQMEILITCFYRPFKMAASSKN
PPCTHDDINSIFLNSETVLFLHQIFLKGLTARMESWPTLVLGTSLGDLFDMLLPMLSIYQ
EYVRNHHYCLQVLTECKQSPSFAQLLNRLEKKPACKGRSLEIFLTYPMHQIPRYIITLHD
LLAHTPPDHVEKKSLEHARDQLEDLSRQMHDEVSETENIRKNLAIERMIIEGCDILLDVN
QVFVRQGTLIQILPSPSSSRPGRSRLNIGREKEREAVRQCFLFSNHLIMTTRTQAGRLHL
VEGTGKIPLANVTLIEDPNEDDRNDDQEYPGSGGSLSDEGEGNTPNTGGKNNLNQNEKKD
FKIIVDEYQSTQQINVHLICPTKQEKAAWITDISQCMDNVHFNGLFYNTLPNASSSTLPQ
CVKSDPSLFKDDVDIRFSKTFNTCKIPQIRYATPERLLQRLTDLRFLNIDFLNTFLLTYR
VFTDSITVLEALKNVFNTSEPLESSSSSLSSIENLGEGHTQHVHHQVTSIPSTECEGKRR
ISTCSGYSTATANLPNVSHHPDTGTNSRHGSLTPRRISGASSVSGYCSDERGSFSTEGGL
TPHMKPQHWRYSFRRYEEEQRETTLGVSSNLQNVEVLSRFGSGSGTGGRRKGSYDSICSG
RSGSIVSTFRKESVPIIEQTEPISEMDDASSNGTSTTEKMEEEISISHSNVSKDTQSSSS
SSSSSTATSSINTDNKSLVKVKSDTGTPYLAVPPHLAASSSAETLTDNTVTAPTSPTNMN
TQIKNLTLKDDPKEKNVQKEVEEGQSSAKVSEKHHGHQPMKRQNSFEEPSKIADLAKTMV
NMPKADITLKGIADKAVEEVGLVGLAHKFTRKTGIRTNTSSSSSGSYTTPYTFNLEEGEK
DATVASSGGSTGGTSIPGSHHSSFSSTSTTRALFGGITFKDFKSPTREIRKKKGLFHNEF
CNSGSSSISGPSGGTSQNPGSNTNTPISSPQHSSKIGVIITSSRQANRRSSSACASIAFA
VATAGSGNPSNNRSPAKKSEDFKELSKRKGSMSSNATTMRVLSVLRHWVTKHPQDFEANP
TLKSASIEFLDDINCIPSLLPAEHRASTQILRMLTKDESDKNKMNLEEILKGTETPSKET
ILSLLALEIAEQMTYLDQKILFAIPCSEFLGQAWTKKDRNIRAPNIVQMTKFFNDFSRLV
CSEIISQTCLNSRIMVIEKWTAVADICRCLHNFNGVLQICAAFTNSSVFRLKNTWNRVSK
SVRHTIDKLQSLVSSDGRFRNLRDTLHRTDPPCIPYLGMYLSDLTFIEEGTPNFTESGLL
NFAKMRMIAHVIREIRQFQQTPYKIERIPKVVNYLLDSGKLMDDEEMYQRSLMVEPRASR
LSSSFGHSMAVAAATVAARHSSAQQEKDSHGTTPN
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtctcatgatgagtcccaaaatgcaacgaattcaaagaacagtacggataaat
gatgggcagctccttggattggcagaaaaggcacgctatgattctcgcctggcgggtttt
ttatttaaaagatgttcagacagctcaaaatggcttttacgatggtttcgtctttatcaa
aatctgctattttactatgacaatgagaacactgtaaagcctattggagtcatattctta
gaaggatgttactgtgaaagccgcctagtatcattatcatcaaagacagaagatacagga
gaaaaattgtattgttttgccatcatgtatcggagagagaatcaacgtcaatatgaactc
cgagcagactccatcaatgaatgtaagtcatggattgacgcaatcaaagctgcaagtttt
aacaaattacgatttcaaatgggagagttagaacagaagcatttgcatttactccaagtg
gttgaaagtgagaaaacagccaagtggcaatacactcagcactgtgaagaactgacggaa
gaaatcaaaaagctaagaaatgaactcttttccctaaaaaaagaatggcgtctcttgcct
caaatgtccaagacaagtagtcaagaaggacgaagctctgggaattcaagtgtagaagag
gaagatcctgacttggcaaagattaagaaagtacaaagtttttttcgtgggtggctttgc
cgaagacgatggaagcaaattgtggatgaatacattcgttcccctcatgcagaaagtatg
aggaaacgaaattgtcttgtatttcgaatggtggaagccgaggaggagtatgtagaacaa
atggaaatcctgatcacctgcttttatcgaccctttaaaatggcagctagctccaagaat
cctccctgcacacacgatgatatcaattcaatcttcctcaactctgaaacagttttattt
cttcatcaaatatttttgaaaggtctcacggcaagaatggaatcttggcctactctggtt
ctaggtacatcactaggggatctctttgacatgttacttccaatgctctccatatatcaa
gaatacgtaagaaatcaccattattgcttacaggttttaactgaatgtaagcaatctcca
tcctttgctcagcttttgaaccgattggaaaagaaacctgcttgtaaaggtagatcctta
gaaatttttctaacttatccaatgcatcagattcctcgatacatcataactctacatgac
ttacttgcccatactccaccagaccatgtagaaaagaaatcattagaacatgctagagat
caattggaagatttgtcacgtcaaatgcacgatgaagttagtgaaactgaaaatatacga
aaaaatctagcgattgaaaggatgatcattgagggatgtgacatccttttggatgttaat
caagtctttgtaagacaaggtacactaatacaaatcctaccttctccatcttcatcaaga
cctggtcgaagtcgtctcaacattggacgagaaaaagaaagagaagccgttcgacagtgt
tttcttttttcgaaccatttaattatgactacgcgtactcaagctggacgacttcatttg
gtagagggaaccgggaaaatacctcttgctaatgtaacattaattgaagaccccaatgaa
gatgatagaaatgatgatcaagaatatccaggttcaggtggatctttgagtgatgaagga
gaagggaatacccccaataccggaggcaaaaataatttgaatcaaaatgagaaaaaggac
tttaaaataattgtggacgagtaccagtctacacaacaaataaacgtacatttaatttgt
ccaacaaagcaagagaaagctgcttggataacggatatttcccaatgcatggacaatgtg
cattttaatggactcttctacaatacccttcctaacgccagctcctctacccttccccaa
tgtgtgaagagtgatcccagtctcttcaaagatgatgtagatattcgattttcaaaaaca
tttaacacttgcaaaatccctcaaattcgttatgcgactccggaacgtttacttcaacgc
cttacggatttaagattcttaaatattgatttcttaaatacttttttgttaacttacaga
gtgtttacagatagtattacagttctagaagctttgaaaaatgtgtttaatacctcagaa
ccacttgaatcctccagcagctcattgagttcaattgagaatttaggagaaggacataca
cagcatgtacaccatcaggtcacttcaattccatccactgaatgtgaagggaaaaggagg
attagtacttgttccggctatagtactgccacagcaaatttaccaaatgtgtctcatcat
ccagacactggaacaaatagtcgacatggatcgttgacacctcgtcgaattagcggagca
agttcagtctcaggttattgctctgatgaaagaggttctttttctacagagggaggcctc
actcctcatatgaaacctcaacattggagatacagctttagacgttatgaagaggagcag
agagaaactactttgggagtttcgagtaatcttcaaaatgtggaagttttatctagattt
gggagtggtagtgggacgggaggacgaagaaaagggtcctatgatagcatctgctctggc
cgctctggatcaattgtctcaacatttcgcaaggagagtgttcctattatagaacaaaca
gagcctattagtgaaatggatgatgcttcttcaaatggcacgtcaacaacagaaaagatg
gaggaggagatatcaattagccattccaacgtctctaaggacacccaatcatctagctcc
tcttcctcctcatcaacagccacttcaagtattaatactgataataaatcactagtcaag
gtcaagtctgatactggtacgccatatttggctgtacctcctcacttggctgcatcatca
agtgctgaaacactgactgataacactgttacagcgccaacttcacctacaaatatgaac
acacaaattaaaaacttaacattaaaagacgatcctaaagagaaaaatgttcagaaagaa
gtagaggaagggcagtcttcagcaaaggtcagtgaaaaacatcacggtcaccagcccatg
aaacgacaaaatagttttgaagaaccatcaaaaatagctgatcttgccaagactatggtg
aatatgcctaaggcagacattactctgaagggaattgcagataaagcagttgaggaggtt
ggtttggtcggattagctcataaatttactcgtaaaactggcattcgaacaaacaccagt
tcttcttctagcggaagctatacaacgccttatacattcaatttggaagaaggtgaaaaa
gatgccactgtggcgtcaagtggaggttcgactggaggtacaagcattcctgggagtcat
cattcctctttttcaagtacgtcaactacgagagccttgtttggtggaattacctttaag
gactttaaaagtccaactagagaaatccgtaagaaaaaaggacttttccacaatgagttt
tgtaactcaggaagcagctctatatcaggcccaagtggtggaacaagtcaaaatccagga
tctaatacgaacacacccatatcttctccacaacatagtagtaaaataggagtcatcatt
acgtcatctagacaagcaaatagacgatcaagttctgcatgtgcatcgatagcatttgcc
gtagctacagctggatctggaaatccatcaaataatcgatcaccagctaaaaaatcagaa
gattttaaagaactatctaagcgaaagggttcaatgtcctccaatgccacgacaatgaga
gttttaagtgttcttagacactgggtcacaaagcatccccaagactttgaggcaaatcct
acattaaaaagtgcttcgattgaattcctggatgacattaattgcattccttcactatta
ccagcagaacatagagcttcaactcaaattctaagaatgctaaccaaagacgagtcagat
aaaaataaaatgaacctggaggagatactcaaaggaactgagacaccatctaaagaaact
attttatccttgctggcgcttgaaattgcggaacaaatgacttatttagatcaaaaaatt
ttattcgccattccttgcagtgagtttttgggacaagcatggacaaagaaagatcggaat
ataagagctcctaatatagttcaaatgactaaattcttcaacgatttttcaagattggtg
tgttcggaaataatatcacagacttgcttaaactcacgaataatggtaattgaaaagtgg
acggcagtagcagacatttgtcgttgtttacacaattttaacggtgttttacaaatatgt
gcagcatttacaaactcttcagtctttcgtctaaaaaatacatggaatcgagtgtctaaa
tctgttcgacataccattgataagcttcaatctcttgtttcatcagatggacgcttcaga
aatcttcgtgatacacttcatcgaacggatcccccctgtattccttatctcggaatgtat
ttatcagatttgaccttcattgaggagggtactcctaatttcacagagagtggactactt
aattttgctaaaatgcgaatgattgcacatgtcattagggaaatacgacaattccagcaa
actccatataaaattgaaaggattcccaaagttgtgaattacttactggattctggcaag
ttaatggatgatgaagaaatgtatcaaagatcacttatggtagagcctcgagcctctaga
ttatcttcttcctttggtcactctatggctgtagctgcagcaactgtcgcagcccgtcac
tcttctgctcagcaggaaaaagactcacatggaacaaccccaaattaa
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integrated database retrieval system
