Lepeophtheirus salmonis (salmon louse): 121115908
Help
Entry
121115908 CDS
T08214
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121115908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121115908
Enzymes [BR:
lsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
121115908
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
121115908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
Fan1_SAP
SPP1_GP23-1
Motif
Other DBs
NCBI-GeneID:
121115908
NCBI-ProteinID:
XP_040566025
LinkDB
All DBs
Position
4:complement(38715093..38717650)
Genome browser
AA seq
748 aa
AA seq
DB search
MSSKLQTHASCPVCNKKVLLIKINNHLDNGECKSNLSLELFPSDDVLFGKKVDEEDDKVS
SRFLSHFKRTKSSSESEILPNSLPPTKRSKQIEESMRDERVKPYYLANWETIVRGVLEEC
PDDANLFTVDEISLATKCFKSLSYDAQKLYVRLFQRKWTWISIKKMSYAEIVNVENTLKE
LEEHFFINDHSSLKDISLIINLLPSPEVKKLCKSFNINKSTKKDIILAFDKLIKQKSFFN
KCGVNEVLQNKIIKKALDSLDPCFILSEEPRRLFNRILSLHSLTRFYEDRDNNNAGNSNL
TVMLLANRGDLLFPIYEISRKQSVFRSREGLLAYETALNFEAKISELSEIKEFREICDNI
YPELRDHFKTEILGKFSKEDAELPDFLRKFTAGGIIVYCFSKCAEAFEKVRNYEAAVSIY
KYCLSKEQVYNKELSSGHWFERLTLDLEQWLKRREEAFFYAKEALENQHISPARKLTLCQ
RIVKMRKHLKEDLKNYHLQGWIDPTKCDELLRNVEIQGSMLDKDLSGNNKSVFIFDTGEQ
DREKLYCSVEEFTIKYYQNEYPMGVHGEGSVINSIVFVLFWDVVYDCLVSDAFRGPYQSS
PLDIGSLTFYESRKKIIESRLESILKESYEKLHALLEKNWKLGQGTSSLVNWDLFSDFSS
FKELIDCFTKEQLCEISRRLLTRHRFFRSGFPDLTLWNPEKKSVRFVEVKGPGDRLSTKQ
IIWLNFLNSIGLDAIVCYVQAIGSKSLH
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaaactacaaacccatgcaagttgtcccgtatgtaacaaaaaggttctcctt
ataaaaattaataaccacttggataatggtgaatgcaaatccaatttgtctttagaactg
tttccttctgatgatgttttgtttggcaaaaaggttgatgaggaagatgacaaagtatct
tcaagatttttatctcattttaaacgaacgaagagcagttctgaaagtgagatcttgcca
aatagtttaccccctactaagcgctcaaaacaaattgaagagtctatgagagatgaaaga
gtgaagccctactatttagcaaattgggaaactatcgtacgtggggtattagaagagtgt
ccggatgatgccaatctctttacagtagatgaaatttcgcttgctactaagtgctttaaa
tcgttatcctatgatgctcaaaagctttatgtgagactatttcaaagaaagtggacttgg
atttcgatcaaaaaaatgtcctatgctgaaattgtaaatgtagaaaatactcttaaggag
cttgaagagcatttctttataaatgatcattctagtttaaaggatatctccttaataatc
aatttgcttccatctccagaggtgaaaaaattgtgtaaaagtttcaatattaacaaatct
acaaaaaaggatatcatcctcgcttttgataaactcattaaacaaaagtcattcttcaac
aaatgtggtgtaaatgaagtccttcaaaataaaataatcaaaaaagcattagatagtcta
gatccctgttttatcctttcagaagaaccaaggcgtttatttaaccgcattctatctcta
cattcccttactcgtttttatgaagatcgtgacaacaacaatgcaggaaactctaatctt
acagtaatgctcctagcgaaccgaggagatcttttatttcccatctatgagatctcccgg
aagcaatcagtttttaggtcaagagaaggtttattagcatatgagacagctctcaacttc
gaggcaaagatttcagagttatccgaaatcaaagagtttagagaaatatgtgacaacatt
tatcctgaacttagggatcattttaagactgaaatccttggcaagttttctaaggaagat
gctgaactccctgatttcctaagaaaattcaccgctggaggaattattgtatactgcttt
agtaaatgtgctgaagcatttgaaaaagtcaggaattacgaggctgctgtatctatttat
aaatattgtctatcaaaagagcaagtatacaataaggaattgtcctctggacactggttt
gaaagactgacattggatttagagcaatggctgaaaagaagagaggaagcattcttctat
gcaaaggaagctctcgaaaatcaacacatatctccagcaagaaaattaactttgtgccaa
agaattgttaaaatgcgaaaacatctcaaagaagatttaaaaaattatcatcttcaaggg
tggattgatcctacaaagtgtgatgaattacttaggaatgtggaaattcaaggatccatg
cttgataaagatttatcaggaaataataagagtgtctttatttttgatacgggcgagcag
gatcgggaaaagttatattgctcagttgaggaatttaccattaagtattatcaaaatgaa
tatccaatgggtgttcatggtgagggctctgtcattaactcaatagttttcgttcttttt
tgggatgtggtgtatgattgtcttgtttctgatgcatttagaggaccttatcaatcatct
cctttggatattggtagccttactttttatgaatcacgcaaaaaaataattgaatcaaga
ttggagagtattcttaaagaatcatatgaaaaactacatgccttgttagaaaaaaactgg
aaattgggacaaggaacttcctcactagtaaattgggatcttttttcagacttctcttca
tttaaagaattgatcgactgttttaccaaggaacaactctgtgaaatatctcgtcgcctt
ctgacaagacatcgtttctttcgatcaggattcccagacttaacgctttggaatcctgag
aaaaagagtgttcgttttgtagaagtaaaaggacctggtgatcgtctttcaaccaagcaa
ataatatggctcaattttttaaatagcatcggtttggatgcaattgtatgttatgtacaa
gccattggaagcaaaagtttgcattaa
DBGET
integrated database retrieval system
