Lepeophtheirus salmonis (salmon louse): 121115961
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Entry
121115961 CDS
T08214
Symbol
rb
Name
(RefSeq) AP-3 complex subunit beta-2
KO
K12397
AP-3 complex subunit beta
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121115961 (rb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121115961 (rb)
Membrane trafficking [BR:
lsm04131
]
Endosome - Lysosome transport
Others
AP-3 complex
121115961 (rb)
Endosome - Golgi transport
121115961 (rb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
INTS1_R4
HEAT_2
Motif
Other DBs
NCBI-GeneID:
121115961
NCBI-ProteinID:
XP_040566084
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Position
1:8327763..8332477
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AA seq
1090 aa
AA seq
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MSTSYQGGGNHGDSPIPTGISSSSGAMDAIEGADSVSFFSSSSDKKTSDSDLGTMLESSK
DSLKLEAMKRIIAIMARGGGGGSTKELFPSVVKNVVSKNVEVKKLVYVYLTRYAEEMPDL
ALLSISAFQRSLKDPNQLIRASALRVLSSIRVSVVVPIVICALKEASVDMSPFVRKTAAH
AIPKVVSLDSETKNELIDVIEKLLGDKTTLVVGSAVMAFSEVCPDRWDLLHKHFRKLCTL
LADVEEWGQVVIVNTLTHYARTQFINPNLSSDMETAKIIKGFYDEEDGDSTSSSDEEDTN
RNKTIPKMDSDHRMLLRSAKPLLQSRNAAVVMSAAQLYFHCAPRPEIQIVSKALIRLLRS
HKEVQSIVLNSIATMTSEKVGTVNSMFESYLRNFFVRGSDPTHIKILKLEIITNLATEGN
IGIILREFQTYITSQDKVCVGATIQAIGRCASSISDVTDTCLSGLVYLLSNRDQSVVAES
VVVIKKLLQTQAGDHKEIIIQMAKLLDTISIPSARGAILWVIGEYSTRVTNVAPDVLRKV
AKSFMVEDDQVKMQVLNLAVKLVITNPKQTKVIAQYIFNLAKYDANYDVRDRARFLRVFI
FPSSSQNENKMIKHSKKIFLASKPAPLLESKFKGRSNYQLGSLSHFLNNRVQGYQDLPEF
PREAPDPSVRNVEPQRASNPWDKYLNSKFDSNKDEKKKKLVKKSKNKEHFYSDRSESSSD
SSESSSSSESSSSSDEEVSNRNNYSSKSKIVNHLTNNRSNVTLNGNCKKGNNSSSEDSSE
DSSSSSDTSSSDDEVEDSSRKIKYEAPKSNLDLLLDLSPNMEGSGGRAQLSNNVKGLCLI
PSNNKADAVEKNGYKMIKPLFVSKTSKELLNKIATGGLQVSYRFTRSHHLASSTMTNVEL
TLLNCDESNTISDIKIGNKNLPSGITLHEFPGIHSILPKQTQIVSLGIDFNDSMQSANFE
ILIDGSNHQVSISAPVGELVQAISMSEEAFKYQLSKLGGMNEISTKVDCVQDKCPLDKSF
IYPLCNVGLVEIFGNMDNYLFAGVTYKHQSFVLISIKHLMENAYQVQINCEKIVFGNLLM
ENIVKALTSS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaagctaccaaggaggtggaaatcatggagattcacctattcctacgggaatc
tcctcttcatcgggagcgatggatgccatagaaggtgcggattctgtaagcttctttagt
tcttcatctgacaagaaaacatcggattcggatctggggacgatgttggagtcttccaaa
gattcccttaaattagaggcaatgaaaagaatcattgccatcatggcacgaggcggcggt
ggtggatccacgaaggaactctttccatctgttgttaaaaatgttgtttcgaagaatgtt
gaagtcaagaaattggtgtatgtctatttgactcgatatgctgaggaaatgccggatctc
gctcttctctccatctctgcttttcaaagatctctaaaagacccaaatcaacttatacgc
gcatctgctcttcgagttctatcgtctattcgagtcagtgtcgttgtgcctattgtgatt
tgtgctttaaaagaagcgtccgtagacatgagtccttttgttcgaaagacagcagctcat
gccattcccaaagtggtttctttggactctgaaaccaaaaatgaacttatagacgttatt
gaaaagttattaggggataaaaccactttggttgttggatctgctgtcatggctttctca
gaggtctgtccggatcgttgggatctcttgcataaacattttcgaaagctttgtactctt
ttagctgatgttgaagaatgggggcaggtggtcattgtgaatactttaacgcactacgca
cgaactcagtttattaatccaaatttatcttcagacatggaaactgctaaaattattaag
ggtttctatgatgaggaggatggagattcgacgtcttcatcggatgaagaggatacaaat
agaaataaaacgattcctaaaatggattcggatcacagaatgttgttaagatccgccaaa
cctcttcttcaaagtcgtaatgctgcagttgtcatgtcagcggcacaattgtattttcat
tgcgcaccacgccctgaaatacaaatagtttcaaaggctttaataagacttttgaggtca
cataaggaagtacagtctattgtactcaattccattgcaacaatgacctccgaaaaagta
gggactgtaaattccatgtttgaatcttaccttagaaattttttcgtacggggaagcgat
ccaactcatatcaaaatactaaagttagaaatcatcactaatttggctactgaggggaac
attggaatcattctcagagagtttcaaacctatattacgagccaggataaagtctgtgta
ggagcaactattcaagccattggtagatgtgcttcatccatatctgatgtcacagatact
tgtcttagtggacttgtttatcttctttcaaatcgcgatcaaagtgtcgttgctgaatcc
gttgttgttataaagaaattgcttcaaacacaagctggtgatcacaaagaaattattata
caaatggcaaaattactggataccatctcaatcccctccgctcgtggtgcaatactatgg
gttattggtgagtattccacccgtgtaactaatgtggctccagatgttttaagaaaagtt
gctaaaagttttatggtcgaagatgatcaagtcaaaatgcaagttttaaatctagcagtg
aaattagtaattacgaatcctaagcaaactaaagtaattgcccaatatatttttaatctt
gcaaaatatgatgccaattacgatgtgcgggatcgtgctcgctttctacgtgtcttcatt
tttccatcctcgagtcaaaatgaaaataagatgataaaacattcgaaaaagatttttttg
gcatctaaaccagcaccattgttagaaagtaaattcaaaggtcggtccaactatcaattg
ggatcattatcacattttctcaacaatagagtacaaggttatcaggatctcccggagttc
cctcgggaagcgccagatccatctgtcagaaatgtggagcctcaacgagcttcaaatcct
tgggacaagtatttgaatagtaaatttgattctaataaagatgagaaaaagaagaagtta
gtaaagaagtctaaaaataaggagcatttttattctgatagatctgagtcatcgtcagat
tcatctgaatcttcctcgtcttctgaatcttcctcatcttcagatgaagaggtttcgaac
agaaataattattcttccaagtccaagatagttaatcatcttacaaataaccgatccaac
gttactttaaatggtaattgtaagaagggtaataatagctctagtgaagatagttctgag
gattcgtcttcctcgtctgatacaagttcctccgatgatgaagtggaagattcttctcgt
aagatcaagtatgaggctcctaaaagtaatttagatcttcttttggacctttcacctaac
atggaaggatcaggtggaagagcgcaactttccaataatgttaaaggtctgtgtttgatt
ccttctaataataaggcggacgcagtcgagaaaaatggatataagatgataaaacctcta
tttgttagcaaaacatctaaggagcttttaaataaaattgctacaggtggattgcaggtt
tcctatagatttactagatctcatcatttggcatcatcaaccatgacaaatgttgaattg
actcttctcaattgcgacgaatccaacactatcagtgatattaaaataggtaataagaat
ttaccttccggaataactttgcacgaattcccgggaatccactccattctaccaaaacag
acccagattgtttcgcttggaattgatttcaatgatagtatgcagtcagctaattttgaa
atattgattgatggatccaatcatcaggtgagtatttcagcacccgttggcgaattagtt
caagctataagtatgtctgaggaagcattcaaatatcaattgagcaaacttggaggaatg
aatgaaatcagcactaaagtagattgtgttcaagacaaatgcccgttggataagtcattt
atttatcctctctgcaatgttggcctagttgaaatttttggaaatatggataattatctc
tttgctggagtcacttataaacatcagtcatttgttctgatttcaatcaaacacttgatg
gagaatgcttatcaagttcaaatcaattgtgaaaagattgtttttgggaatttattgatg
gagaatattgtcaaagctctcacaagttcatga
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