Lepeophtheirus salmonis (salmon louse): 121115964
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Entry
121115964 CDS
T08214
Name
(RefSeq) nuclear factor of activated T-cells 5-like
KO
K17335
nuclear factor of activated T-cells 5
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121115964
Transcription factors [BR:
lsm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
121115964
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
121115964
NCBI-ProteinID:
XP_040566086
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All DBs
Position
4:42161968..42175900
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AA seq
1107 aa
AA seq
DB search
MEEASNVSGEENYVEDGGNGKKRKYCGAGSSSAPEILKEENSSLLFSSLFKSYSSSSKNG
KRTLKILNQPEQQHRARYQTEGSRGSVKDREGSGFPTIQFKGYHGPEKKLRLQVFIGSDQ
GRPVLPHVYYQACKVAGKNSTPSQEWRQEGTDIILMDMEVDKDFIVRCDCVGILKERYSD
IESKIPAQKQRTNWKKKSTKCRMVFRIEFEEEDGSKETLQVVSDPISCSQQPGTPEILKM
STDISSLPGGGELWMIGKNFLKDAVVVFLENLPNSEALHRAPWRQIIHPDKDFFNNSHMI
VTIPPYTLGPGVENRSSCPIDVSVFVKCGEKTSDSHSFTYRLKETTKDHNSSTSSSPKSF
SPIRSNRSNPSSRITILEPVETRYMTKEEIDYCEDTVFDPEKTQEDVKGSYVYHRKSIQE
ESNSVSFSNITNHNNNNNTDEELKSDRLTTFSNLFQKEKPSNNVSHSIGDSSLGVMVIPK
ISSDTLKAAQKELLKNVGDVAVESKIMVNGNSNGTLTNPTQEFLGTNIESKSATNGPIYI
QGTESDNATISIKLPNSIISNSEKFENVMNTINKALLQPDPTLKSIDSNLARVNISRNSN
TTNNNSTTTPSAPVPEQVPSQTTQVAPAPLTPAAPTPLVAVASEPPELNPKKQKINEQVI
TSQPSSNWLETWNTSTTTTAPIAKEAPKGHTPMDTTPFFTTQAPPEPSSTWSEQPPPQEK
SQISLSNIIPELKSNPAAAVSENWNSVKVEAENWSKSAPTTWSSNVAATESWHTPATTVT
VTQNWVAPSESNKNWSDNQVATSETWPNAATVVATDNIVISTAAIPPPVPEVVWQTKQNE
ATPNPVNEVPPASTNSWPEKAKEQVIVASANWSTDSKKETNGSEAPNWFNEPAKINNIWN
EEWGSSGSSVNGAGGGTKPGEVQHHTPAPQWNVNEKPLTRDHSITSTWSADSTSTNDQNT
PTQQNWVPEAGKLGAWNNQVGEGNGATNGLTDKKGIGEIVVAPFISQEMTPIDPKKVMYD
PSPMEVDGVFNKSKMDYKASEINSNSGSIKGNPLLSESSGIISQQQKIESAIIGPGKVSE
YQPIKYQPTTEGLYQLFSNTPAPEVQK
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcttcaaatgtcagtggcgaggagaattacgtggaggatggagggaatgga
aagaagaggaaatattgtggagcaggttcgagctcagctccagagatcctaaaggaagag
aactcttccctcctctttagctccctcttcaaatcctattcctcctcttctaaaaacggg
aaacgaaccctcaaaatcctgaatcagcccgaacagcaacaccgcgcccgatatcaaacg
gagggctcacgtggatctgtgaaggatcgtgaaggctccggtttccctaccattcaattc
aagggctaccatggacctgaaaaaaagcttcgtctacaagtgtttattggctcggatcaa
ggccgcccagttttgcctcatgtctactatcaagcctgtaaagtggcggggaaaaactcc
actccgagtcaggagtggcgtcaagaaggcacagacattattttgatggacatggaggta
gataaagacttcattgttaggtgcgattgtgtcggtattctgaaagagcgctattcagat
atcgaaagtaagatacctgcccagaaacaaaggaccaattggaaaaaaaagtccacaaag
tgtcgtatggtatttcgtattgaattcgaagaggaagacggctccaaagagacattgcaa
gttgtttcggatcctatttcttgttctcagcaacccggaacgccagaaattctcaaaatg
tccactgatatttcctctcttccaggaggcggagagctgtggatgatcggtaaaaacttt
ctcaaggatgctgtagtcgtctttctagagaacttaccaaattctgaggcgcttcatcga
gctccttggagacaaattattcatccagataaagatttttttaataattctcatatgatc
gtcacaattccaccttataccttgggaccaggagtagaaaatagatctagttgtccaata
gatgtttcagtttttgtaaaatgtggtgaaaagacttcagactctcattcatttacatat
cgattgaaggagaccaccaaagaccataattcttcaacaagctcatcacccaaaagtttt
tctccaattagatccaatagaagtaatccttcatcaagaataaccattttagagcccgtg
gaaacgagatatatgacaaaagaagaaatagattattgtgaggacacagtttttgatcca
gaaaaaacgcaagaggacgttaaaggatcctatgtgtatcaccggaaatccattcaggaa
gaatctaattccgttagcttctctaatattacaaatcacaacaacaataataatacggat
gaagaactcaaatccgatcgtcttacgactttttcgaatctctttcaaaaagaaaaaccc
tctaataacgtttcacactccataggagattcttcactaggcgttatggtgattcctaaa
atatcatcagatactcttaaagcagctcaaaaggaattgcttaaaaacgtgggtgatgtg
gctgtagaatctaaaatcatggtgaatgggaattccaacggaactctaacaaatcctact
caagaatttttagggaccaacattgaatcaaaatccgctacgaacggtcctatatatatc
caagggaccgagagtgataatgcaacaatctccattaagctgcctaactcaattatatca
aattcagaaaagtttgaaaatgttatgaatactattaacaaggctctgcttcaacccgat
cccactctcaaaagtatcgatagtaatttggctcgagtgaatatatcgcgcaatagtaat
acaacgaataacaattccacgaccactccatcagctcctgtgccagagcaagtaccaagt
caaacaacacaagtggcaccggctcctttaacaccggcagcccctacgcccctagttgcc
gttgcctctgagccccctgagttgaatcccaaaaaacaaaagataaacgaacaagttatc
acctctcaaccaagttcaaactggcttgaaacttggaacacctctacgaccacaacggcc
ccaatagcaaaagaagcacccaaaggacacactccaatggacacaactccctttttcact
actcaagcaccacctgagccttcttctacctggtcagagcaacctccacctcaagaaaaa
tctcaaattagtttatccaatatcattcctgaactcaaaagtaatcctgcggcagctgta
tcagagaattggaattcagtcaaagttgaggctgaaaattggtccaaatctgctcctact
acttggtcatccaatgttgctgcaactgaatcctggcatactccagcaactactgttacg
gtaactcagaattgggttgctcctagtgaaagcaataaaaattggagtgataatcaagtt
gcaacgtcagaaacatggcccaatgccgcaactgttgttgcgacagataatattgtcatt
tctacagctgcaattccacctccagtaccagaagttgtttggcaaaccaaacaaaatgag
gcaactcctaatcctgtaaatgaagtcccccctgcttctacgaattcctggcctgaaaag
gcaaaggaacaagttattgtagcttctgctaattggtcaacagattcaaagaaggaaaca
aatggttctgaagctccaaattggtttaatgagccagccaaaattaataatatatggaac
gaagaatggggtagctctggaagtagtgtgaacggtgctggtggaggtacaaagccaggt
gaggtacaacatcatactccagcccctcaatggaatgtaaatgaaaagccattgacaagg
gaccattctataacctcgacttggtcagccgactcaacaagtactaatgatcagaataca
cctactcagcaaaattgggtgcctgaagcaggtaaacttggtgcttggaataatcaagta
ggagaagggaatggagcaacaaatggacttactgataagaaaggtattggagaaatagtg
gttgctccctttatttcccaagagatgactcccatcgaccccaaaaaggtcatgtatgac
cctagccctatggaagtggatggagtctttaataagtcaaaaatggattataaagctagt
gaaataaactcaaatagtggatcaataaaggggaatccccttctttcagaatcatctggt
atcataagtcaacagcagaaaatagaaagtgcaattattgggcctggaaaagtatcagag
tatcaacctatcaagtatcagcctacaacagagggcctctatcaattattttcaaacaca
cctgcacctgaagttcagaaataa
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