Lepeophtheirus salmonis (salmon louse): 121115976
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Entry
121115976 CDS
T08214
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121115976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121115976
03036 Chromosome and associated proteins [BR:
lsm03036
]
121115976
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121115976
Coactivators
SAGA/TFTC/STAGA complex
121115976
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121115976
STAGA complex
121115976
TFTC complex
121115976
SAGA complex
121115976
SLIK complex
121115976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CENP-S
Motif
Other DBs
NCBI-GeneID:
121115976
NCBI-ProteinID:
XP_040566095
LinkDB
All DBs
Position
4:42203287..42205711
Genome browser
AA seq
552 aa
AA seq
DB search
MNSMAEERKELGADSIKTAAESLGLSSILHEDAAKELAEHLTYRIRMLIQDAQKYAFHGK
RSKVQSEDLDYALRMEGQEPLYGMSCCEYIPFRYASGGGMSGGGSGSVGLSNNNNNVSSS
CSALCKEVYFLEDKEIDLSTLISSTPLPKIPMAVSLRSHWLAIDGIQPMIPENPPAKSKE
MLKKESSDPLAKLSSREASDNKFSSLLAKLKSTETVTVKQLATHELSVEQQLYYKEITEA
CVGSDEGRRAEALQSLACDPGLHQMLPRLCTFIAEGVRVNVVQHNLAILIYLMRMVKSLL
ENQTLFLEKYLHELLPAVITCIVSRQLCSRPEVDNHWALRDFASRLMNNICKNFNTSTNN
LQTRVTRLFSEAMKNESSPLVSYYGAIAGLQELGPEVIKVFIIPYLKQISKQIDRAQDSN
LGSSNVEKTASTHIRNSIVKFTSPVLKTIRPLPDLIEEYKADYGSLGAYLHAGVQRSRGT
SGSASSAGGGSGSSGSGGGGKAPNTSNVTPGNVGGTKILQSKPPGSGASGSGSTQRIIVV
NNQRIVQGGGSI
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaatggcagaggaacggaaggagttgggagcggattccatcaagacagcagcc
gagtccttgggcctctccagcattcttcatgaagatgcggcgaaggagctagcggaacac
ttgacttataggattcggatgttgattcaagatgcccaaaagtatgcgtttcacgggaag
cggagtaaagttcaatctgaagacctggactatgctcttcggatggagggtcaagagccg
ctgtatgggatgtcgtgttgcgagtacattccgttccgctatgcctctggcggaggcatg
agtggtggcgggagcgggagtgtgggcctctccaacaacaacaacaacgtgagctcgtct
tgcagcgccctttgcaaagaagtgtatttcctggaagacaaggagatcgacctctccact
ttgatttcctccactcccctccccaagatcccaatggcagtgagtctgcgctctcattgg
ttggccatcgatggtattcagcccatgattccagaaaacccgcctgctaaatccaaagag
atgctcaagaaggaatcctctgatcctctggctaagctgagttcccgagaagcgagtgat
aacaagttttcgtctctgcttgcaaagttgaaatccacagagacggtgacggtgaagcaa
ctcgcaacgcatgaactcagtgttgaacagcaactctattataaagaaatcacggaggct
tgtgtgggttcggacgagggacgtcgtgccgaagcgttacaatccctcgcctgtgatcct
ggacttcatcaaatgcttcctagactctgcactttcattgcggaaggtgtgcgtgttaat
gtggttcaacacaacttggctattcttatttacctcatgcgcatggtcaaatctcttttg
gagaatcagacccttttccttgaaaaatatctccatgaacttctacctgccgttattacc
tgcattgtaagtcgacaattatgtagccgtcctgaagttgataaccattgggcattgaga
gactttgcaagccgtctcatgaataatatttgtaaaaacttcaatacctcaaccaataat
ttacaaacaagagtaacaagattatttagtgaagcaatgaaaaatgaaagttctccctta
gtttcatattatggagctatagctggacttcaggagctgggaccagaagtaattaaagtt
tttattattccttatttaaaacaaatatcaaagcaaatagacagagcccaagactccaac
ttgggaagctctaatgttgaaaaaactgcatctactcatattcgtaactcaatagtcaaa
tttaccagtcctgttttgaagacgattcggccattacctgatcttatcgaagagtacaaa
gctgattatggttcacttggagcttatcttcatgctggtgtacaaaggtctaggggcact
tcaggctctgcttccagtgcgggtggcgggagtggtagtagtgggtctggcggaggagga
aaggctcctaatacatccaatgtcactccaggcaatgttggaggaactaaaattttacaa
tctaagccacctggatcaggagcaagtggatctggttctactcaaagaataattgtcgtc
aataatcaacgtatagtgcaagggggtggatcgatttaa
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