Lepeophtheirus salmonis (salmon louse): 121116046
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Entry
121116046 CDS
T08214
Name
(RefSeq) rabankyrin-5 isoform X1
KO
K20129
rabankyrin-5
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121116046
Membrane trafficking [BR:
lsm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121116046
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
FYVE
BTB
ANK_LRRK2
FYVE_2
zf_Tbcl_Rhp7
BACK
Motif
Other DBs
NCBI-GeneID:
121116046
NCBI-ProteinID:
XP_040566177
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Position
4:complement(44602555..44691472)
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AA seq
1129 aa
AA seq
DB search
MSEKSDELSKVQGHLQLLRSEYVKLQNKCSALEKENALLKASHGGLSAGGIAESNSFPVR
LLETARGLYNSQQYSDLEIKLSDQQLFAHKFIFKTRGQRWRGKDIDNEDLHCLDWSDLDS
KVGVALIKWIYTDHINFSDYDDSFLLDLMKGADIFGFLRLQTQCETSLISSVGPHNCIRY
FATAEEIYAEDLKRHCSNLISTHWNEFSKEDFSHLQGPLLYSMLKSKIQYTLHYAIKIHR
EDVVFLYLIEPKSAEGVNALDDNGELPLDLALRSGQKSLAQSLVEHGANVNQLNQDGVPL
LNLAISRGDIFSSEFLIDNGAFSKLTSSSDGNHPLHLVAKDPQMISIASKLIAKGADINC
INHSSMTPLHLCLESKNKDFFDYLTSLNDLKFEEKNINGLPPLWFALQDEDNFSFAEGLC
SKGISLNTVCNSNGDSLLHLLANADLEKSCMFLINSSGCQTNLANIHGNTVLHLAAENGL
LELAEALLEGPNASKEIIESQNVPDRQTPLHLAISKSHKTVVNAILAFCSTNCKEKNEAT
NFNLKNSFGQTPLSLALSKNLHEVAMRLIESGANVNICDSTGLTLLHLAIMDGNESGSIF
LMNHGADIDMRTSNGETPLELAIANRLPIVLETLCRKGANLSSSTSTGDPPLWMALQASL
DLAHVLLRYGVDTDSWSVGPGGCYQTLLHRAIDENMDEAAKFLIRSGCDLLSPRKLGPNG
QGGEEARDMSSPLNLCCRWGQAGIVEVLLEHEAPINSRDAEGKTPIHVAIEEGDTSIINI
LLDHQPNLTLRDNSGVTPFASAITFKNNKAAQKILDIEPTAAEIYDSRGRNFLHTAILRK
DLESVLFLISIKANIHSITQDSNRLSPLLLAVQLGNDMIVRNLLLAGASVSDVSGCGQTA
LHIASEHNFPLIVGILLSNGIDFTIVDNRGNNALHIAVKEGHSEVVRTLLLESQIDAEAL
NNKGRNPLHILANFGGDSSSKIFDIFLKYMHDYPIDKPDAEGNTPLLLAYMKGNGNLCRS
LVKNGAILGSINHDGVSLFNYKVATKQLLFKLLDCLDNEPKWGEGDVCQECSEKFGLTKR
KHHCRHCGRLLCSKCSDKHMPILKYNLPKPVRVCDVCADILTIGPVFTT
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaaaagtgatgaattgtccaaggtccagggtcatttgcaactactccgatcc
gaatatgtcaaattacagaataaatgctctgcgttagagaaagagaatgcattattaaag
gcatcccatggtgggttatcggctgggggaattgcagagagtaattcttttcctgttcgg
cttctcgaaacagctcgaggactttataactcccagcagtacagtgatttagaaatcaaa
ctctcagatcaacaactcttcgcacacaaatttatttttaaaacccggggacagagatgg
agaggcaaggacattgataatgaggatcttcattgcttggattggagtgaccttgattca
aaagtaggagttgctcttatcaaatggatatatacggaccatatcaacttctccgactat
gatgattcatttctgttggatttgatgaaaggagcggatatatttggatttttgcgacta
cagactcagtgcgaaacctcattaatttcatctgttggaccacataattgtattcgttac
tttgcaactgctgaggaaatttatgcagaggatttgaaaagacattgctctaatcttatt
agtacacattggaatgagttttcaaaagaagacttttcacatcttcaaggacctctcctc
tactctatgctaaaatccaaaatccaatacacacttcattacgctatcaaaatccatcga
gaggacgttgtatttctatatttgattgaaccaaagagtgctgagggcgttaacgcattg
gatgacaatggggagttaccattggatttagctctcaggtccggtcaaaagtctctggct
caatcccttgtagaacatggtgcaaatgtcaatcaactcaaccaagacggagtacctctt
cttaatttagcaatttccagaggtgatatattttcgtcggagttcttaatcgataatgga
gccttttcaaaattgacaagttcatctgacggtaatcatcctcttcatttagtagctaaa
gatccccaaatgatttccattgcctccaaattaattgccaagggtgcagatattaactgt
attaaccattcctcaatgactcctcttcatctatgtctcgaatccaaaaataaggatttt
ttcgattatctcacttcattaaatgatttaaagtttgaagaaaagaacattaatgggctt
cctcctctttggtttgcacttcaggatgaagataatttcagttttgcggaagggctttgt
tctaaaggcatctctttaaatacggtatgcaactcaaatggagattcccttttgcattta
ctagcaaatgcagacctagaaaagtcctgcatgttcctcatcaactcctcgggatgtcaa
accaacttggccaatatccacgggaacaccgttcttcatttagcagctgaaaatggactt
ttagaactagcagaggccctactagagggaccgaatgcctccaaagaaataattgagtcc
caaaacgtacctgatcgacaaactccccttcatttagccatttctaaatctcataaaacc
gtagtgaatgctattttagcattctgctccacaaattgtaaagagaagaatgaggccaca
aatttcaatttgaaaaactctttcgggcaaactcctctatcgttggctctctctaaaaat
ttacatgaagtggcaatgagactgattgaaagtggtgcaaatgttaacatatgtgactca
acgggtcttacactcttacatttagccatcatggatggtaatgagtctggttctattttc
ctaatgaatcatggagctgatattgacatgaggacatcgaatggagaaacgcctcttgaa
ttggctatcgcgaatagattaccaatagtgctagagaccctttgtagaaaaggtgctaat
ctatcatcatcaacatcaacgggagatccacccctatggatggctcttcaagctagttta
gatttggctcatgttcttctgagatatggagtagacacagactcttggagtgttgggcct
ggaggctgttatcaaacattacttcatagagccatcgatgaaaatatggacgaagctgcg
aaatttttaatccgctcaggctgtgatctgttaagtccaaggaaacttggtccgaatggt
caagggggagaagaggcaagggacatgtcttcacccctcaatttatgctgtcggtgggga
caagctggtattgttgaagtacttttagagcatgaagcgcccattaattcccgggatgca
gagggcaaaactcctattcatgttgccattgaagagggcgacaccagcattataaatatt
ctattggatcaccaacccaatttgactcttagagataattcaggtgtaactccctttgcg
tcagcaattacttttaaaaacaataaagcagctcaaaaaatattagatatagagccaaca
gctgcggaaatatatgactctcgtggtcggaatttccttcatactgcaattcttcgaaaa
gatctggaaagtgttttgtttcttatatcaattaaagctaacattcattccatcactcaa
gactcaaatcggcttagccccttgttattggccgtacaactcggaaatgacatgatcgtt
aggaaccttttgttagcaggagcttctgtgagtgatgttagcggttgtggacaaactgca
cttcatatagcatcagagcataatttccctttgatagtaggcatattgctatcaaatggt
attgacttcacgatagtggacaatcgagggaacaatgcgctacatatagcagtaaaggag
ggtcattctgaagtcgttcgcacactattgctcgaatctcaaattgatgcagaggcatta
aataacaaagggcggaatcctcttcatatccttgctaatttcggaggagattcatcttct
aagatatttgatatatttttgaaatatatgcacgactatcccatcgataaaccggatgca
gaaggaaacactccattacttctggcatacatgaaaggaaatggcaatttatgccggtct
cttgtgaagaatggagccattttgggatccattaaccacgatggagtatccttatttaat
tataaagtagcgaccaaacaattactctttaaacttttggattgtttagacaatgaacct
aaatggggagagggcgacgtttgtcaagaatgttcagaaaagtttggcctcacaaaacga
aaacatcattgccgccattgtggacgtctcctttgttcgaaatgctctgacaaacacatg
ccaatactcaaatacaatttacccaaacccgtccgtgtctgtgatgtttgtgctgatatc
cttactataggacctgtattcacaacatga
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