Lepeophtheirus salmonis (salmon louse): 121116054
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Entry
121116054 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121116054
Transcription factors [BR:
lsm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121116054
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121116054
NCBI-ProteinID:
XP_040566199
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Position
4:complement(45365711..45382981)
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AA seq
418 aa
AA seq
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MVEGMMSFASAHHRGPGGSAAGSDSLSRMTSMTNSISPPSQEAYMLVPEKKNKLHELSNH
IKRPMNAFMVWSRMKRRQIAQENPKMHNSEISKRLGSEWKTLSESEKMPFIDEAKRIRAR
HMQDHPDYKYRPRRKPKNMKAPNYPYTMPYPSVSMDALRAGQMSSYYSPYTSAGFSAAQM
AAAAAAAAAAQSSSQMGSSMDAALKYGSYMSLYGGGGGANSNSCEPNSSETSSPGGVSVQ
PSKSSPYSNEDNKPHFEPKASNYSAESISRSYFDMHRYSSIGSGETGASPDAGSNHSESR
EERESPSKGATSLLSQHQQQQQDYSTHQQALHAYYSQAASLHGGNNSAAVAAAAVSSHYP
PHAHHSFMAAAAHQYPANPASPYAPSGTVSHQGGPPAIIHPPTSTSSDEYRKPLSVLF
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaaggtatgatgtcctttgcatccgcacatcaccgtggtcctggaggatcagca
gcaggaagtgactccctttcccgaatgacctccatgacgaattccatatccccaccttca
caagaggcctatatgcttgtcccagaaaaaaagaataaactccacgaattatcaaatcat
attaaaagacccatgaacgctttcatggtctggtcacgtatgaagcggcgacagattgct
caagaaaatcctaaaatgcacaattccgaaatatccaagcgattagggtccgaatggaaa
acgcttagtgagtccgagaaaatgcctttcatagatgaggccaagcgcattcgtgctaga
cacatgcaagatcatccagattacaaatatcggccacgtcggaagccaaaaaatatgaaa
gcaccaaattacccatacaccatgccttatccttcagtctccatggatgcactccgtgca
ggccagatgagtagctattattcaccctacacttctgcaggattctctgctgctcaaatg
gcagccgccgctgcggctgcagctgcagcccaatcatcatctcagatgggatcatccatg
gacgcagccctcaaatacgggagctacatgtccctctacggagggggaggaggtgccaac
tccaacagctgtgagcccaatagttcagagacatcctctcccggcggtgtatccgttcaa
ccttccaaatccagtccctacagtaatgaagataacaaaccccactttgagcccaaagca
tccaattacagcgcagagtctattagtcgtagttattttgatatgcatcgctactcatcc
ataggaagtggagagacgggagcctctccagacgcgggtagcaaccatagtgaatccaga
gaagaaagagagtctccttccaagggggctacatccctactgagtcaacatcaacaacag
caacaggactattccacacatcaacaggcccttcacgcctattatagtcaagctgccagc
ctccatggaggaaacaactctgcggcagtcgcagcagctgctgtttcctcacattatcct
ccacatgcgcatcattcattcatggctgcagcagcacatcaatatcctgccaatccagca
tctccctatgcaccctcagggactgtttcacatcaaggagggccaccagctattattcac
ccgcccacttctacttcgtcagatgaataccgaaagccattgtctgttctcttttga
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