Lepeophtheirus salmonis (salmon louse): 121116089
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Entry
121116089 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: orphan steroid hormone receptor 2-like
KO
K08544
testicular receptor 4
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121116089
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lsm03310
]
121116089
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
121116089
Nuclear receptors [BR:
lsm03310
]
2. Hepatocyte nuclear factor 4 like
2C. Testicular receptor
121116089
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
121116089
NCBI-ProteinID:
XP_071744101
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Position
4:48188639..48206770
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AA seq
751 aa
AA seq
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MTTPHRRSTLKIGGRDDEEEYSSSVMLGSLLRGILPDLISTTTNNVNNSDSTVSGGPNNP
GTSTPPAHFLLPPPRGLIVNPAAYLAASPFLYGNSALSYAREWQAKLKELQDAKVVAATV
AALNSSSQAAQEHLLSKLPSSPSCGNSSNTNSNNSGGSPPSASLFESLKETSIQKGRSSP
KKSSSPLSFTTAASNSNNSNNILSSLNRKSTELMKMDSNGALNLASSASPSPTDSGGGNN
LIMAGGGGSVGRNGGSTQAFGIEACVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQ
CRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDSPRVSAVQSERRPIVPANVSNAVTAAL
AENISISNAKNSSPVYHIYDSPTLLSRNSLGPSSDSILSSHDTNVKAASTIVLGTSGSGG
IGSGGIGDEDNTSTDAGSLNGDYSHLDASHVLAAREKSLISRAMDVMTKTICEDEEEEPN
EDINNSSIDESETIIQDSLVNFKLSTPSPTPFYLNVHFICETASRLLFLSVHWVRTIPCF
GQLSYESQVGLVRNSWSDIFVLGMSQCSKSMNLQSILTAIVSHLQTSVSQERLSATRVRQ
VTSTICKVQEYVRTMSKMCITDHEYAYLKAISLFGADQVGISSGKKIDKLRQKTVSELKE
YCTLQDDENRFSNLLLRLSPLRSLQPDILEELFFAGLIGNVQIDSVVPYILKMEASEYQS
QFVKKMEVDEPGDESSSKLENNHSSSTPVSL
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcctcaccgccgttcgactctgaaaataggagggcgggatgatgaagaggaa
tactcctcttccgtcatgttgggatcccttctacgaggcatactcccggacttgatctcc
actacaaccaacaacgtcaacaattcggactccactgtttccggaggacccaataatccc
ggaacatccactcctccagctcattttctgctaccacctccacgtgggctcatagttaat
cccgctgcctatttggctgcgagtccatttctctatggaaactctgccctcagttatgca
cgggaatggcaagctaaactcaaagagcttcaagacgcaaaggtcgtagctgccacagtt
gctgcactcaactcatcctcacaagcagcacaagaacacctcctatctaaattaccctca
tctccttcctgtggaaacagtagtaataccaacagcaacaactctggaggatcccctccc
tccgcatccctctttgaatccctcaaagagacttcaatacaaaaaggccgttctagtccg
aaaaagagctcttctcccctctccttcactactgcagcctcaaacagtaacaacagcaac
aatattttatcctcactgaatcgcaaatccacggaattgatgaagatggactccaatgga
gcccttaatctggcctcctctgcgtctccatctccaactgactccggaggtggcaacaat
cttataatggctggcggaggaggttcggtcggtagaaatggtggctcaactcaagccttt
gggattgaagcctgtgtcgtttgtggtgaccgagcttctggccgacactatggggctatc
agctgcgagggatgcaaaggttttttcaaacggtcgatacggaaacagctcggatatcaa
tgtcgaggcaacaaagactgtgaagtaacgaaacatcatcggaatcgatgtcagtactgt
cgtttacaaaaatgcctcgccatggggatgagaagtgattcaccccgtgtttcagctgtt
caatctgagcgaagacctatcgttccggccaatgtatctaatgcagtaacagcagcactt
gcagagaatatttccattagcaacgcaaagaactcatctccagtctatcacatctatgac
tcccctactcttctatccaggaattcattgggaccttcatcagattccattttgtcatcc
catgataccaatgttaaagcggcatcaactatagtattaggcactagtggcagtggtgga
attggaagcggaggtataggtgatgaagacaatacctccacagatgcgggttccctcaac
ggagactattctcacctagacgcctcacatgtcctcgctgcaagagaaaagtctctcatt
tcacgagccatggatgtcatgacgaaaacaatctgtgaggatgaggaagaggagcccaat
gaggacattaataacagtagtatcgacgagtcagaaactatcattcaagactctcttgtg
aactttaaactcagcactccaagtcctactcctttttatcttaatgtacattttatctgt
gaaacagcatccaggctcctctttctttccgttcactgggtcagaaccattccttgtttt
ggtcagttgagttatgaaagccaggtcggccttgttcgtaactcatggtcggacatattt
gtactcggtatgtctcaatgctcaaagagtatgaacctccaaagtattctaaccgctatc
gtcagtcatctacaaacttcagtctctcaagaaagactgagtgccacaagagtacgtcaa
gttacgagtaccatttgtaaggttcaagagtatgtacgaaccatgtcaaaaatgtgcatc
acggatcacgaatatgcctatttaaaggctatttctctctttggagcagatcaagtcggt
atatcctcaggaaagaaaatcgataaactccgacaaaaaacagtctctgaactgaaagag
tactgcactctacaagatgatgaaaatcgcttctcaaacttgctccttcgtctttcgccc
cttcgctctcttcaacccgacattctagaagaactcttctttgctggactcattggcaat
gttcaaatagattcagttgtaccttacattttaaagatggaagcatccgagtatcagtct
caattcgtcaaaaaaatggaagttgatgaacctggagacgaatcatcatccaagttggag
aataatcattcttcgtctacccctgtttctttataa
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