Lepeophtheirus salmonis (salmon louse): 121116123
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Entry
121116123 CDS
T08214
Name
(RefSeq) uncharacterized protein isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
121116123
Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
121116123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_8
PH_20
PH_alsin
PH_13
FYVE_2
PH_9
Motif
Other DBs
NCBI-GeneID:
121116123
NCBI-ProteinID:
XP_040566283
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All DBs
Position
4:complement(49203867..49282534)
Genome browser
AA seq
1488 aa
AA seq
DB search
MGWKIVLSGLLNNGPSPGEGGFLSPSEIKFEDEEENETSPLKGKKRVLKRSQSIQIKDSP
LHRGSLIGSPAFRRKKRRAKSESTLTSSPSRRNPPPLPSRKKITGKLVTANGLTLKESTQ
EILAKKHQLLSASLILKAAASSHKPTVPPKPPRPLSTYNNFKESEEVRDQQSRALARSDP
SKSTLFTSFFNRLTSLRRSFNRGDKPSTSYAHQDWTSFFREKSSSLEVEGDQNTYAEIDE
SLHGRYLTIPKEVPIAPPRRKRPRIAAHLRRSLSFTDAYVIAQAVVEGDGSLIRELYPDF
PRSEEPLYAIVDLSRKKKHRQTLVEMSPYRRLESSNIYEECNGVGEAPPIPPRPGFIRNN
NPLETSSSVSTIGLVGEDPFITPIKSDNQTHTKIKSSESPSLDFYCPKEPPLVISPWNNS
STPSSNQNLIIECPSTSNTPKYNISHPFAQRTRSHYENNNHEIDQGANIGLRRSDDSFQK
ILDTADSSLLQAESILSSLRISHNEEEEEAMEDDETESLWRRDNEEEEDVSSDIESNIRR
LEMTQAKINEALETFRQVQLSRRSDNAGSVVGPFKTTPIKGRKILRGSLSQTAPPKVEKM
MRKGNSHSTLVESTTNNVSGMDNHHQNSQQQEQQQQNSTRSMKPPGLFRRHSFNLQHNNN
NAPASSSSNQHSNQKESNGHNTNWYDEENHQDHDASGGGGYSDSEGGGIRRRIRGLFGSF
GKGGNSSSTTGNSNSGSTSSVFYTGNSSTAGHKKNEDLGSKAGDPSLLSKFNSSELFSQT
VGEFTRRIESLNRPPEDENQSKSSSSSSSCSSSVAHHQTYSRLKYHATLAKNDSNDTSSL
GSGSQFSNRHSVISTHSLSSFEHDDDDSDEEQNKHPSSVSSSGPLEEEDEEAEPNPGRRK
KKQVFYIAREIMTSERVFVDVLHLLDVELKDFIDSKRRNGKKLIPEGDLNKIFSNLSELH
ALNKDLLSDFEERIQNWETFPKIADVIVKKGPFLKLYTTYIREFSDVNMHFDECLMKYQK
FAKVVKEFESLERCRNLKIKHFMLKPVQRLPQYKLLLEDYLKHLDPVNSLDFDDTTNALR
IVSDAAEHANDTIRQGDKFRRMLKLQSRLGDQELIRPGRELIKEGELQKISRKGIGPRYF
ILLSDVLLYATYSSGNRSDSSGLRVSYSIPLNTLSVRVLPHYETEFSVSSPVRSCTLRAS
SVSERNEWIEALNHGIEEHRNRKATFFPGSSSDIDCDQLDVVGNCAPVWIPDRRVTMCQN
CTVEFSVLVRRHHCRACGKVVCASCSGNKAPLRYKGFEVGRVCDECFDSLERELGHVENL
KHRFKKRHLSNNLERQTGSGLISSGPGLPGSYPTHPHGRYVPGRLKVRAVGEGAQMSGYL
KRRIQKSGKWKRMWYVLKDRVLYAYRASEDTVATDTFPVLGFTLDTLSDKNFELYEGESA
DLVFQLTHPGSESLIFCAENDNVSEKWITALGEAVKLNSPPVGTLIEI
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgggttggaaaatcgttctttctggtcttttaaacaatggacccagcccgggagaagga
ggcttcctttctccttctgagatcaaatttgaggatgaggaggagaatgaaacttcgcct
ttgaagggcaagaaacgtgttctgaaacgatctcaatccattcaaataaaggattcccca
ctccatcgtggatccctcattggatcgccagcatttaggcgtaaaaaacggagagcgaaa
agtgagtccacattaacttcttctccctcacgacgcaatcctccacctcttccatctcgt
aagaaaataactggtaaattagtcactgcaaatggactaactctcaaagaatctacacag
gaaatcctagcaaaaaaacatcaactccttagtgcatcactcatcctaaaagccgccgca
tcgtcacataaacccactgttcctccaaagcctcctcgtcccttgtccacatacaataac
ttcaaggagagtgaggaagttagagatcaacagagcagagcacttgcccgctctgatccc
tccaagtccacactctttacctcctttttcaatcgacttacaagccttcgccgttcattc
aaccgtggagataaaccctcaacctcctatgcccatcaggattggacttccttctttcgt
gaaaaatcttcctccctagaggttgaaggtgatcaaaacacatatgcggaaattgatgag
tctctccatggacgttacttaactatccctaaagaagttcctattgctcctcctcgacga
aagagaccacggattgcggcacatctacgacgatctctctccttcactgatgcgtatgtc
attgcacaagctgttgtggaaggggatgggagtctgataagggagctgtatccggatttc
cctcgatccgaggagccgctctatgctattgtggacttaagtaggaagaaaaagcatcgg
caaacgcttgtggaaatgagtccgtataggagattagagtccagtaatatttatgaagag
tgtaatggtgtgggagaagcaccgcccattccgccaaggcctgggttcatcagaaacaac
aaccctttggaaacgtctagtagtgtttctaccattgggttggtaggagaggatccattc
atcacacccattaaatcagataatcaaacccacacaaaaatcaaatcatctgagagtccg
tccttagacttttattgtcccaaagaacccccattggtcatcagtccttggaataacagc
agcaccccttcctctaatcagaatttgattatcgagtgtccctcaacttcaaacaccccc
aaatacaatatttcgcatccctttgcacagagaaccaggtcccactatgaaaacaataat
cacgaaattgatcaaggtgctaacattgggttacgccgctcagatgattcgtttcagaaa
atattagacacggcagactcttcgctactccaagcagagtccatactctcctcgcttcga
atctcacacaacgaagaagaagaagaagctatggaagacgatgagactgagtccctctgg
cggagagataatgaagaagaggaggatgtgagctcggatatagaaagcaatattcgtcgt
cttgaaatgactcaagcgaaaattaatgaagcattggagacttttagacaggttcaactt
tcacgccgatctgataatgctggtagtgttgttggaccctttaaaacgactccgatcaag
ggccggaaaatcttgcggggtagtctctctcaaacagctcctcctaaagttgaaaagatg
atgcggaaaggaaatagtcattccacgctcgtggagtctactacaaataatgtctcaggc
atggacaatcatcatcaaaatagccagcagcaggaacaacagcagcagaatagtacccgc
tcaatgaagccccctggcctcttccgtaggcattcctttaatcttcaacacaacaataat
aacgctccggcctcctcctcatctaatcaacacagcaatcaaaaagagtcgaatggccac
aatactaattggtacgatgaagaaaatcaccaggatcatgacgcaagtggcggcggagga
tactctgactctgaaggtggaggaatacgccggcggattcgaggcctatttggctccttt
ggtaaaggaggaaattcatcatcaaccaccggcaatagtaactctgggagcacatcctct
gtattctataccggcaactcttcaactgctggtcataaaaagaatgaggaccttggctct
aaagctggagatcctagccttttatcaaaatttaacagctctgagctattttcgcaaaca
gttggtgaatttactcgccgaatagagtcattgaaccgccctccagaggatgaaaatcaa
tctaaatccagctcttcttcctcttcctgttcatcctcagttgctcaccatcaaacgtac
tcacgcttaaaatatcatgcaacccttgcgaaaaatgattctaatgatacgtctagtctt
ggaagtggtagtcaattttctaatcgacacagtgtgataagtacccattctctgagcagt
tttgaacatgacgacgatgactcggatgaagaacaaaataagcatccttcctccgtctct
tcatctggtcctttagaagaagaagatgaagaggcggaaccgaaccccggtcggaggaag
aagaaacaagtattttatattgcaagagagatcatgacttcggaaagagtgtttgttgat
gtcttacatcttctggacgtggagttaaaggatttcatcgactcaaaaaggaggaacgga
aagaaattaattccagagggcgatctaaacaagatattttctaacctctctgagcttcat
gcattaaataaagacttactctcggactttgaggagagaattcaaaattgggaaaccttt
ccaaagatagctgacgtcattgtcaaaaaaggtcctttcttaaaactctacaccacttac
atacgggagttttcggatgtaaacatgcatttcgatgagtgtcttatgaaatatcaaaag
tttgcaaaagttgtcaaggagtttgagagcttagagcggtgtcgtaatttgaaaattaag
cactttatgctgaagcccgtgcagcggcttcctcaatataaacttctactggaagattat
ctcaagcatttagatcctgtgaatagtttagattttgatgacacaaccaatgcccttcga
atagtttcagatgcagctgagcatgccaatgatacaatacgccaaggagataaatttcgc
agaatgctgaaattgcaatctcgcttaggcgatcaagaactcattcgaccgggtcgtgaa
ttaatcaaggaaggagaacttcaaaaaattagtcgtaaaggtattggacctcgatatttt
atccttctaagtgatgttctcctttatgccacctattcttcgggtaatcgatccgactct
tcaggactgcgagtctcttactctattcccctcaataccttatccgtcagagtccttcct
cactatgaaacagagttttccgtctctagtcctgtccgtagttgtacgttacgtgcatct
tctgtatccgagaggaatgagtggatcgaggctctcaatcatggaatagaggaacatcgg
aatcgaaaggctacatttttccctggatcatcctctgatattgactgcgatcaattggat
gttgtagggaattgtgctcctgtttggattccggatagaagagtcaccatgtgtcaaaat
tgcacggtggagttctccgttcttgtacggaggcatcattgtcgagcctgtggaaaggtg
gtttgtgcctcctgttctgggaataaagcaccacttcgctataagggatttgaagtggga
cgcgtctgtgatgaatgctttgactcacttgaacgtgaattgggacatgttgagaattta
aagcatcgatttaaaaaacgtcatctatctaataatttagagcgtcaaacggggagtgga
ctcatttcctctggacccggacttcctggctcttatcccactcatcctcatggacgctac
gtccctggaagattaaaagtacgagccgtaggagagggtgctcaaatgtcaggctatttg
aaaagacggatacaaaagagcgggaaatggaaaaggatgtggtatgtactaaaggatcga
gtcctctatgcctatagagcctccgaggacactgttgctactgataccttccctgttctt
ggattcactctggacacattgtcggataagaactttgagctctacgaaggagagtccgcg
gatctcgttttccaattgacacatccaggaagtgagtcccttatattctgtgctgaaaat
gataacgtctcagaaaaatggatcactgccctcggggaagccgttaaattaaacagtcct
ccagttggtacactaattgagatttga
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