Lepeophtheirus salmonis (salmon louse): 121116162
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Entry
121116162 CDS
T08214
Name
(RefSeq) vacuolar protein sorting-associated protein VTA1 homolog
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121116162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121116162
Membrane trafficking [BR:
lsm04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
121116162
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Gene cluster
GFIT
Motif
Pfam:
Vta1
Vta1_C
Motif
Other DBs
NCBI-GeneID:
121116162
NCBI-ProteinID:
XP_040566330
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Position
4:complement(51540987..51542121)
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AA seq
264 aa
AA seq
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MGSLKIPPIPSSLKAIAHFLNVASEHENRDPVVTYWARVHALEIGMKLDKKSKEALGVLL
PLMDWLESEKKVLNNREEVTSNVVANAHMENYALKLFSWADKEDRASRFNKNVIKAFYTA
GNILEILSTFGEQTQDILRIKKYAKWRAAYIHKCLKEGITPTPGSEEHETSDQEEDEGKD
NNLTPVIGASSSYHQPQDSNVVEEEEVNLPASSRREEEMDPHVVIQAQKYCKYATNALDF
ANKQSAIENLEKALQLLQIGALSH
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgggatccctcaaaatacctccaattccttcatctttgaaggccattgctcactttttg
aatgttgcctccgagcatgaaaatagggatccggtcgtcacttattgggcgcgtgtccac
gccctggaaattggaatgaaattggacaaaaaatccaaagaggcccttggagtcttgctc
cctctcatggattggcttgaatcagagaagaaagtgcttaataatagagaggaagtgaca
tccaatgtggttgccaatgctcatatggaaaactacgcacttaagttattctcatgggct
gacaaagaggatcgcgcatcccgctttaacaaaaatgtcattaaggccttctacactgct
gggaacatattggagatactttcaacatttggagagcaaactcaagatatcctacgaata
aagaaatatgccaagtggagagcagcctatattcataaatgtctgaaagaggggatcact
cctacacctggttcggaagagcatgaaacatcagatcaagaagaagacgagggaaaagat
aacaatttgactcctgtaattggagcctcctcttcatatcatcaacctcaggatagcaac
gttgtcgaggaggaagaagttaatctgcctgcctcatccagaagggaggaagaaatggat
ccccatgttgtaattcaggcacaaaagtattgtaaatatgcgacaaatgctctagacttt
gcgaataaacaatctgctattgaaaatttggaaaaagctctacaattattgcaaataggt
gctttgagtcattaa
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