Lepeophtheirus salmonis (salmon louse): 121116194
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Entry
121116194 CDS
T08214
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121116194
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
121116194
NCBI-ProteinID:
XP_040566371
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All DBs
Position
4:complement(53002791..53016874)
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AA seq
1847 aa
AA seq
DB search
MRPQIELTVLTILIICNLFLIEVKGYTPLARGCDQRSCYPATGNLLIGRQDKLTANSTCG
SGRRERYCVLSLLDNTSPSNSRQNCFWCDSTEQGTYSNPRTSHNINNIVYRMGRDQGGNS
FPTWWQARNGEEYVTIQLDLEAEFHVTHLIMTFKTFRPAAMYIEKSYDWGTTWKIHRYFA
ADCESSFPGVPVGVPKYLNETVCQTRYSRQIPSTKGSVIYRVLPSNVNIRSPGFNPYSQE
VQTLLKTTNMRIHMTRLHSLGDENLLSDIKEKYYYAIYDMTIRGSCSCYGHAERCLPDKE
EHANIPGMVHGRCDCTHNTKGNNCEFCQDDFNDVPWRPATGKKKNECKKCNCHNHATKCV
FNPVLYAATGEVSGGVCSNCQHNTDGHHCEYCIFGYYQDPNLDLTHPDICKPCDCEPEGT
IDDGVCDGRTDEREQTVAGMCHCKRFIDGPRCDHCKTGYWNFTASNPYGCQECTCYMDGT
IAGEGGCDQQTGHCTCKRNVIGRDCDQCYPQHFGLSAADPEGCKPCDCDVGGSYDNDCDV
QTGQCRCRPHISGRRCDQIDDGYFTGPLNYLLFEGETAHGTVNPPTQVIKKEQNPGGNDW
SGFGFMKAFEGSELTFHVPGIFKGMEYDLMTRHKNTPSHLSDWADVKISVIPLDGPPDPN
GPCANKPVDAEIIRQPLFAQSGSTPTPTPLCLEEGKRYEIKYLFDQYDTNNPDPKANILI
DSIALIPRTDEVDIFQGSPLAETAASEFERNRCRERFMMQRPNEEIMEPCKSLLNSISYY
VFNGGSNKQCECDSTGSESTLCDKYTGQCPCKKSVVGRKCDQCAPGTFDFGADGCQPCFC
HNIGSLDPFCRQSDGQCNCDERAYGRRCNECQPGYWNFPNCQPCECNLHADTCDSQTGEC
INCRDATAGFHCEHCAPSYYLDLRADVNKRCRECPCPFSKASGHSFAESCYLDASSGEPI
CECDVGYSGTRCKSCDDNYFGSPELPTGSCVPCNCSNNWNFEDTGNCDTTTGQCLKCLFN
TEGFECEHCKPGFFGDAVNNTCQECQCDILGSDPDKFDCDRSTGLCNCLPNVIGDHCDRC
EEDHWKIGSGEGCESCDCDPFGSSSKTCNVYTGQCECRPGFGGRRCDQCEENYWGNPQVE
CFPCNCNPQGSQSYQCDHATGKCICLEGIGGEKCDECAIGFFQETHLSPESPVHSRTISY
SDSPRCRECGECFTNWNRILTDLSNKTKEKVAKAEMVKVTGVTGAYTRAFEDMEGKLGQV
KDILRSASVSNDELLGVHREIDGIDAALKSTTDKLDTLDNDLAVTKQSIFQDKTNLDILR
SEADQLKLDASEMKDQTTRLQEANVEGALNLTRMAKSKSDEAAANVRQINLPGGDLFASQ
SRRKDTETVIQTSGQYFAETQTQNQETLQNIIQQISNLENKIPDLNKQICDGETSKEKEC
DNLCGGAGCNQCGGLSCLNGAVTMAGTAVKSAEDADAILIEKDREAEQVLRDATKADLNT
QRAANAAQVAYDRANEARNRSAGEMTRINELLEKIKEFTEGEKATPEDVKKLANECLAAE
MSLDASEIQNLAGQINEAISSVTNVDQILQETEEDLLKAQSLQVRADDTRVRAASQLEEA
TRVTSSLSNAVEDQNKADIAIQEASEDIIAARSDLEKISDQMETAVGSADASFNGVSELA
ERQKNLQTVFIQNENHVNSAQNAAIQAKNQADSANAELYQLNKGFKNVSESLRGKMNTIG
ISKDKAIDLQRRASELSTSASSKLGNLLDVEKEFERNEETLTQLNAELIRLNCEMMIHLQ
VVESKSKYYRNCSPPEEWSPSSSCQCLPGQSEPTCTSRREAPTLYNQ
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctcaaattgaactcacagtattaactatattaataatatgtaatttatttctt
atagaggtgaagggctatactccactcgcacgaggatgcgatcaacgatcttgctatcct
gcaacaggaaatctcctcattggtcgtcaagacaaacttactgcaaattcaacttgtgga
tccggaagacgagaacgttactgtgttttatcactcctggataacacttcaccttcaaat
agtcgacaaaactgcttttggtgtgattcaactgagcaaggaacctactcaaatcctcga
acttctcataacattaataatattgtttatcgtatgggaagagatcaagggggtaactcc
ttccctacttggtggcaagctcgtaacggagaagaatatgttacgattcaattagattta
gaagcagagtttcatgtaactcatttgataatgacattcaaaactttccgacctgcagcc
atgtacattgaaaagtcatatgattggggtacaacttggaagatccacaggtactttgca
gcggattgcgagtcttcctttcctggagttcctgttggagttcctaaatatttaaatgaa
actgtgtgccaaaccagatactcacgacaaatcccaagtacaaagggctcagtcatttac
cgtgttcttccctctaatgtaaacattcgatcccctggatttaatccatattctcaagag
gtccaaacgcttttgaaaacaacaaatatgaggattcatatgacaaggctacattctcta
ggcgacgaaaatctgctatctgacatcaaggagaagtactactatgcaatttatgacatg
accatccgtggatcctgttcctgctatggtcacgctgagcgatgtctcccagacaaagaa
gaacatgcaaatatccctggaatggttcatggaagatgtgattgcacacacaataccaaa
ggaaataattgtgaattctgtcaggatgattttaacgatgtaccatggagacccgctact
ggaaaaaagaaaaacgaatgcaaaaaatgtaattgtcacaatcatgccacgaaatgtgta
ttcaatcctgtcctatatgctgctactggagaggtatccggtggagtttgtagcaattgt
caacataatacagatggtcatcattgtgaatattgtatctttggctattatcaggatccc
aatctggatttgactcatccggatatttgtaaaccttgtgactgtgagcccgagggaact
attgatgatggtgtttgcgatggaagaacagatgaaagagagcaaactgttgctggaatg
tgtcattgcaaaagattcatcgatggaccacgatgtgatcattgcaaaacaggttattgg
aacttcacggcaagcaacccttacggatgtcaagaatgcacttgctatatggatggtaca
attgctggagagggaggctgtgaccaacagacaggacattgcacatgtaaacgcaatgta
atcggaagggattgtgatcaatgctatcctcaacattttggactttctgctgctgatcct
gaagggtgcaaaccatgtgattgtgatgtaggtggatcttatgacaatgattgtgacgtt
caaacaggacaatgtcgatgccgtcctcatatatctggaaggagatgcgatcaaattgac
gatggatattttactggacctttgaattatttattatttgaaggagagacagcacatgga
acagtgaatcctccaacacaagtgatcaaaaaagagcaaaatcctggggggaatgattgg
tctggatttggtttcatgaaagcatttgagggttctgaattaacattccatgttcctggt
atttttaaaggaatggagtatgatttaatgactagacacaaaaatacaccaagtcatttg
agcgattgggctgatgtcaaaattagtgtaattccgcttgatggaccacctgatccaaat
ggtccatgtgcaaacaaacccgttgatgctgaaataattagacagcccttgtttgcccaa
tcaggatctactcctactccaactccactttgtttggaagaaggaaagagatatgaaatt
aaatacttatttgatcaatatgatacaaataacccagatccaaaagcaaacatcctaatc
gattcgattgctcttattccaaggacagacgaggttgatatcttccagggttcaccttta
gccgaaacagcggcatcagagtttgaacgaaatagatgtagggaaagattcatgatgcaa
cgtccgaatgaagaaataatggaaccttgcaaaagtcttttaaactcaatctcttactat
gttttcaatggtggaagtaacaaacaatgtgaatgcgattcaactggttccgaatctact
ctctgtgacaaatatactggccaatgtccctgtaagaaaagtgtagtagggcgaaagtgt
gatcaatgtgccccagggacctttgattttggagcagatggatgtcaaccatgcttttgc
cataatattggatcattggatcccttctgtcggcagtccgatggtcaatgtaattgtgat
gaaagggcttatggaagacgttgtaatgaatgccaacctggttattggaattttcccaat
tgccaaccctgtgaatgtaatcttcatgcagatacctgtgactctcaaactggagaatgt
atcaactgccgagatgctacagctggattccattgtgagcattgtgccccaagctattat
ttagatctgcgtgctgatgtgaataaacgttgtagagagtgtccttgtcctttttcaaag
gcatctggacattcatttgcggaaagttgttacttagatgctagtagcggcgagcctatt
tgtgaatgcgatgtgggatactcaggaactagatgtaaatcctgtgatgacaattacttt
ggtagtcctgaactcccaactggatcctgtgttccatgtaattgtagtaataattggaat
tttgaagacactggtaattgtgacacaacaactggtcaatgtcttaaatgcctattcaat
acggaaggctttgaatgtgaacattgtaaaccaggattctttggagatgcagtcaataat
acctgccaagaatgccaatgtgatattttggggagcgatcctgataagtttgactgtgac
cggtcaactggtctttgtaattgtttaccaaatgttattggagatcattgtgataggtgt
gaagaggatcattggaaaataggaagtggagaaggttgcgaaagttgtgattgtgatcca
tttggatcttcttcaaaaacttgcaatgtatacactggacaatgcgaatgtcgaccagga
tttggaggacgtagatgtgatcagtgcgaggaaaattattggggaaatcctcaggttgaa
tgctttccttgtaattgtaatcctcaaggatcgcaatcctatcagtgcgatcatgcaaca
ggaaaatgtatttgtttggaaggcattggtggtgagaaatgcgatgaatgtgccattgga
tttttccaagagactcatctttctccagaaagtccggttcattcccgtacaatatcctat
agcgattctccacgatgtcgtgaatgtggagaatgtttcacaaattggaatcgtattctg
acagatttatcaaataaaacaaaagaaaaagttgcaaaagcagaaatggttaaggtgact
ggagtcacaggagcatacactcgcgcatttgaagatatggagggaaaattgggacaagtt
aaggatatcttgaggagtgcatctgtttccaatgatgaactcttgggagttcatcgagaa
atcgatggaattgatgcagctctcaagagcacaacggataaattagatacccttgataat
gacttggctgtaaccaaacaatccattttccaagataaaacgaatttagatattctaagg
agtgaggctgaccaattaaaattggatgctagtgagatgaaggatcagacaactcgtctt
caagaggctaatgtagagggtgctttgaatcttacacgtatggcgaaaagtaagagtgat
gaagctgcagctaatgttcgacaaatcaatttacctggtggagatctatttgcctctcaa
tctcgtcgtaaagacacagagacggtaattcagacttcggggcagtattttgcagaaact
cagacacaaaaccaagagactctacaaaatattattcagcaaatttcaaacctagaaaat
aaaatcccggatttgaacaaacaaatttgtgatggtgaaacatccaaagaaaaggaatgt
gacaatttatgtggaggagcgggctgtaatcaatgtggagggttaagttgcttgaatgga
gctgtaactatggcaggaactgctgtgaaatcggcagaggatgcagatgcaattcttata
gaaaaagatagagaggctgaacaagtcctacgagatgctacaaaggcggatctcaatact
cagagggcagccaatgcagcccaggtagcatatgacagagcgaatgaagcaagaaataga
tctgctggggaaatgacacgaattaatgagttattggagaaaattaaagagtttacagag
ggagaaaaagcaacccctgaggatgttaagaaattagctaatgagtgtcttgctgcagaa
atgtctttagatgcttctgaaattcaaaacctcgctggccaaatcaatgaagctatttca
tctgtaacaaatgtcgatcaaatcctacaagagacagaagaggatcttttgaaggcacaa
tctcttcaagttcgagcagacgatacgcgggtgcgagcggcttctcaattggaagaagca
acaagagtaaccagttctttgagtaatgcagtggaagatcagaataaagcagatattgct
attcaggaggcctcagaggacattattgctgcacgaagtgatttggagaagatatcggat
caaatggaaactgcagttggatctgctgacgcttctttcaatggtgtatctgaacttgct
gaaaggcaaaagaatcttcaaacagttttcattcaaaatgagaaccatgttaattctgct
caaaatgctgccattcaagccaaaaatcaagctgactctgccaatgcagagttatatcaa
ttaaataagggcttcaaaaatgtgagcgaaagccttagaggtaaaatgaataccataggt
atttccaaggacaaggccattgatcttcaaagaagagcaagtgaactttcaacttctgct
tcttctaaacttggaaatcttttagatgtggaaaaggaatttgagaggaatgaagagacg
ctgactcagctaaatgctgagttgatacgactcaattgcgaaatgatgattcatttgcaa
gtcgtagaaagtaaatccaaatattatcggaactgttcacctcctgaggagtggagtccg
tctagttcctgtcaatgtttaccaggtcagtctgagccaacgtgtacaagtcgaagggag
gctccaacgctgtataatcaataa
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integrated database retrieval system