Lepeophtheirus salmonis (salmon louse): 121116215
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Entry
121116215 CDS
T08214
Name
(RefSeq) codanin-1-like
KO
K19531
codanin-1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121116215
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
121116215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
Motif
Other DBs
NCBI-GeneID:
121116215
NCBI-ProteinID:
XP_040566396
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Position
4:53500759..53507410
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AA seq
1219 aa
AA seq
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MSMSSSESLLRWFIGSKDVTFKDFLSWYKGEDPLSLEAIGSAPMTLGDMEALKPELVLSL
LNFIRDESTLILEKSQSVCQTPSKGNHPSKYDYHSPVKKVTPLTLEDQPRLLPEKSHARR
SLEGLSSGNKKPHGRRLSNEVQLSDLIVKKKTPKSRKKIDLISQDVSEFNNPAFGSSPTK
ETTPLTHTPSPASPLTLKTPQKANSVIKCPTLDPSPDNVLFQTQLDKLIQLYSFCLDENL
VPNILVELYLILELLTVRETEKSTKKAIASSNYLHSVHNCVYFATQVLSLQWERLLQFCD
RVTLRLLLDNQRLDIFVPQLKPKLTIIYEQKREKNNHNHSMSQTTFGDGSIQSVRFQSET
DNRANFPTTQSFQYFRKQRDLFYEILRESEADERSSSLKTPDTKKKIKVKVETLLASSHP
VNLIHLARLFQCQLVGTCFSFLINGSSSTTDEPALDTLDEMQELKSIDPIKYQRLQSRFT
TPSMFGGPCPKPEFIGPQEFFRDFISSCNNHQFIEHLKTHLVGTMIELNDYSFTLLDKNE
NSSGNVWQLEEEIFETVTTLKILAKYLGYIESIPYVCSSENIPDTLVASQISLRKNVTPA
LDLVQILRQSLQEERLVVTLPWMVEYCSMIDPISVHLPYYQELFSMLVNIYRTVLLPKKN
CGDGNRRSFNTMNNFFLCLSLGWLFENPSFPRELLVDSKEMKTIKPATHTIEKKRVRHPS
KYEISLDNTPCVTQNLLYTSCPYLSELKSILSQFLSKDPVKVETLNSTPPVTSSPRIMPT
AILSSAEKIKQPISQRSSLQVEMEENFFHNQPASLRKTIEFIAERVASNCVKTLRSVLIG
QERKKASKAIKERIDKEEIDNSSPSSLKNKLLVEVENIARESCGKVRSIGPDWISERMKE
SISLSLKSLLAEDTSQVVFNTSIKITERKTLEIACQWIEDHVTLRYFIKDYQQEFNHSLR
LNAQKSENEETVPLPIVISSGVQEIKKVISDDSEEQSIHDDINLHPSKLLIRLKEDLKLM
LLTNNPLFFTEESVINVLKNIKICLTNSREMISTLGVLGFENLTVDWIMSLITFSPDCLT
SNVFDHLMEVWTQHLFIQSQIMTILCPRNMVLLGQSTQPFLTWQRLERLLYSLLKSKILI
PLALEDQCIQLLKQEWPEAILKKFASSLRGVVLFWKDSNLHSRSNDDEIEFVQLMEWIVW
YCSSAEDYTPDKQEFPELG
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgagtagcagtgaatctcttctgcgatggttcataggctccaaagacgtgacc
ttcaaggatttcctgagttggtacaagggagaggatcccctgagtttggaggcgattgga
agcgcccccatgacccttggggatatggaggccctgaagcctgaattagtgttgagcctg
ctgaactttatccgtgatgaatccacgttaatcctggagaagtcccagagcgtgtgtcag
actccgagcaaagggaatcacccctccaagtacgactatcactcccccgtcaaaaaggtg
actcctctcaccctggaagatcagcccaggctattgcctgaaaagtctcatgcgcgaaga
tccctggaaggactcagctccggaaacaaaaagccacacgggcgtcgattaagcaatgaa
gttcaacttagtgatttaattgtcaagaaaaagactcccaagtctcgtaaaaaaattgat
ctcatctctcaagacgtctcagaattcaacaatcccgcatttggttcttctccgacgaaa
gaaacgacccctttgacacacaccccctcgccagcatctccactcacccttaaaacgcct
caaaaggcaaatagtgtcatcaagtgccctactctggatccctctccagacaacgttctc
tttcaaacccaattagataaacttattcaactctattctttctgcttggacgaaaacctt
gttccaaacatactcgtcgaactatatttgattctcgaattactcactgtgagggaaact
gaaaagtctactaagaaagccatcgcatcttcaaactacttacattccgttcataactgt
gtatattttgcaactcaagtcctatctcttcaatgggaacgtcttctacaattttgtgat
cgtgttactctaagattgctgttagacaatcagcgtttagacatttttgtacctcaatta
aaacctaagctaacaatcatttacgaacagaaaagggaaaaaaataatcataatcattcc
atgtcccaaactacgtttggggatggatccattcaaagtgttcgttttcaaagtgagaca
gacaatcgagccaacttccccacaacacagtcttttcaatattttcgaaagcagcgtgat
ctattttatgaaattctgcgcgagagtgaagcggatgaacgatccagctcactcaaaacc
cctgacacgaagaaaaaaataaaagtcaaagttgaaactctccttgcttcttcacatcct
gtgaatttgattcatttagcccgactctttcagtgccaattagttggaacttgtttctct
ttcctaattaatggatcctcctccactacggatgaaccagctctggacactctagatgaa
atgcaagagctcaaatccatcgaccccattaaatatcaaaggttacaatcccgcttcacc
actccatccatgtttggaggtccatgtcctaaaccagagtttataggtcctcaagagttt
tttagagatttcatctccagctgcaataatcatcagtttattgagcacttgaaaacgcat
ttagtggggaccatgattgagctgaacgattattcgtttactcttttggataaaaacgaa
aatagttcagggaatgtttggcaattagaggaagaaattttcgaaacggtgacgactctc
aagattttggccaaatatcttggctacattgagtcgattccttatgtatgctctagcgaa
aacattcctgataccttggtggcgagtcaaatctctcttagaaaaaatgtcacacctgca
ctagatctggttcaaatacttcgtcaatctctgcaagaggaacgcttagttgtcacacta
ccttggatggtagagtattgttccatgatcgaccccataagtgtgcatctcccttattac
caagaacttttttcaatgctcgtcaacatttatcgaactgtgttacttccaaaaaagaat
tgtggtgatggcaatagaagaagctttaatacaatgaacaatttctttttatgcctatcc
ttggggtggttgtttgaaaatccttcgttccccagagagcttttagttgattcaaaagaa
atgaaaaccatcaaaccagcaactcatactattgaaaagaaaagagttcgacatccaagc
aaatacgaaatatctttggacaatactccttgcgtgacacaaaacctactctatacttca
tgcccatatttgtctgagctcaaatctatccttagccagtttttatctaaagaccccgtg
aaagtggagactcttaatagtactcctcctgtgacctcatctcctcgaattatgcctact
gccattctatcttccgcagaaaaaattaaacaacccatatcccaaagatcaagtctgcaa
gtagaaatggaggagaatttctttcataatcagccagcctccttacgtaagaccattgag
tttatagctgaaagagtggcttctaattgcgtgaaaacgttgagaagtgttcttattggg
caagagaggaaaaaggcgtccaaggcaatcaaggaacgcatagacaaagaagaaattgat
aatagttctccatcttcgttgaaaaataaattacttgtcgaggtagaaaatatagcaagg
gagtcttgtggcaaggtaaggtctattggccctgattggatctctgagaggatgaaagag
tccatatctttatctctaaagagcttattggctgaggacacatcccaagttgtcttcaat
acttctataaaaataacggagagaaagactttagaaattgcatgtcaatggattgaagat
catgttacgcttcgttattttatcaaagattatcaacaagagttcaaccattcattacgg
ttaaatgctcaaaaaagtgagaatgaagaaactgttcctctaccaatagtaatatcttct
ggtgtccaagaaattaaaaaagtcattagtgatgatagtgaggaacaatctatccatgat
gacattaatttacatccctcaaaattactcattcgccttaaagaggatcttaagttaatg
ttgttgacaaataaccctcttttctttactgaggaatctgtgataaatgttttgaaaaat
attaaaatatgtttaacaaatagtagggaaatgatatctactcttggagtccttggtttc
gaaaatcttaccgttgactggataatgtctttgatcacgttttctccggattgtttgacc
tccaatgtctttgatcatttaatggaagtttggactcaacatctatttatacaaagtcaa
attatgacaattttgtgtccccgcaatatggtactccttggtcaatccactcaacccttc
ttgacatggcaaagactggagaggttattatacagtcttctcaagtctaagattttaatt
ccattagctttagaagatcaatgtattcaattattaaaacaagagtggccagaggccatt
ttaaagaaatttgcgagttctctaagaggagtagttctgttttggaaagatagcaacctt
catagtcgctccaatgatgatgaaatagaatttgttcagctcatggaatggattgtgtgg
tattgctcttcagcggaggattatactccggataagcaagagtttcctgagcttggctaa
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