Lepeophtheirus salmonis (salmon louse): 121116359
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Entry
121116359 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog 1
KO
K04482
DNA repair protein RAD51
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03440
Homologous recombination
lsm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121116359
03460 Fanconi anemia pathway
121116359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121116359
04121 Ubiquitin system [BR:
lsm04121
]
121116359
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121116359
Membrane trafficking [BR:
lsm04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121116359
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
121116359
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
121116359
RecA family proteins
121116359
FA (Fanconi anemia) pathway
Other FA pathway factors
121116359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
HHH_5
ATPase
DnaB_C
AAA_22
HHH
AAA_28
Motif
Other DBs
NCBI-GeneID:
121116359
NCBI-ProteinID:
XP_040566539
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All DBs
Position
4:2057984..2059373
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AA seq
350 aa
AA seq
DB search
MEQEESREEMEEGEETSTSSLAQGEEEEEGFGPMPISVLEQHGISASDVKKLSEVGYHTV
ESIVYAXKKSLLAIKGISEAKADKLLAEGQKLIPTGFTTATEMHIRRSQIIQITTGSKEL
DKLLKGGIETGSITELFGEFRTGKSQLCHTLAVTCQLPIDHGGAEGKCLYIDTEGTFRPE
RLLAVAERYNLSGNDVLDNVAYARAYNSDHQSQLLIQASAMMAESRYALIIVDSSTALYR
TDYSGRGELSTRQMHLARFLRMLLRLADEFGVGVVITNQVVAQVDGAAMFSADPKKPIGG
NIMAHASTTRLYLRKGRGEQRICKIYDSPCLAEGEAIFAITADGIGDSKD
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggaagaatcgcgagaggagatggaggagggggaagagacttccacttcttcc
ctggcgcagggcgaggaggaagaggaggggtttggaccaatgccgatttccgtcttggag
caacacgggatatccgcatcggatgtgaagaagttgtcagaggtgggttaccacacagtg
gagtccatcgtctacgccnccaaaaagagtctccttgccatcaagggcatttcggaggca
aaggcggataaattactcgccgaaggacagaaactaattcccacgggcttcacgacggcc
acggaaatgcacatccgacgctcccagataattcaaatcacgacggggtccaaggagttg
gacaaactcctcaaaggaggaatcgaaactggatccatcacggagctctttggagagttt
agaactggaaaatcccagttgtgccacactttggccgtcacttgccaattgccgattgat
cacggaggtgcggaggggaagtgcctctacatcgacacggagggtacattccgtccagag
aggctacttgctgtggctgagcgatacaatctctcgggaaatgacgttttggacaatgtg
gcctacgctcgtgcttacaactcggatcatcaatcccaattgctcattcaagcttctgcc
atgatggcagagtcacgatacgctctcatcattgttgacagttccactgcactttataga
acagactattcgggcagaggggaactctccactcgacaaatgcatttagcaagatttttg
aggatgctgctacgtttggcggatgagtttggagtaggtgttgtcataactaatcaagtg
gttgctcaggtggatggtgctgccatgttctctgctgatcccaaaaaacctattgggggt
aatatcatggctcatgcatccaccacaaggctctatctcagaaagggaagaggcgaacag
agaatttgcaaaatatacgattctccatgtctagcggaaggagaagccatctttgctatc
actgctgatggcattggagattccaaagactaa
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