Lepeophtheirus salmonis (salmon louse): 121116429
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Entry
121116429 CDS
T08214
Symbol
Use1
Name
(RefSeq) vesicle transport protein USE1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121116429 (Use1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121116429 (Use1)
Membrane trafficking [BR:
lsm04131
]
SNARE
SNAP-25[C] (Qc)
Use1
121116429 (Use1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Use1
TetR_C_17
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
121116429
NCBI-ProteinID:
XP_040566615
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Position
4:complement(4883135..4884443)
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AA seq
275 aa
AA seq
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MKSTTGTTFRILRSEKHEKLSEDEVRFNKMWDALQSLVSEGTYSGEFDPRIGPFLRRLEG
LLFKIGQNSENIEEYEAKLKSLNNFVDEDKLFDFDYDLPRERKRSAKSPSNAKQNNRLII
PPPPLANLDNDSVQKEIFRKTIERYRAQDRKELFESNKGESSRLRKRRDEQSAQSLIHDQ
DVAQEEIAEQMLSLTKSLKEQTEAANRMIHRDISSLEGTRRTADENIDKLAVESDRLQEH
RSTFNCRCWIWILMFIVVMTFLKMLVIMKLFKKPT
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaactacggggactacttttcgaattttgaggagtgagaaacatgagaaattg
agcgaagatgaggttcgtttcaacaaaatgtgggatgcattgcagtctctcgtatcggaa
ggtacatattctggagaattcgatccccggataggaccttttcttcgtcgacttgagggt
cttctttttaaaatcgggcaaaattctgaaaatatagaagagtatgaagctaaattaaaa
tccttaaataatttcgtggatgaggacaaactctttgatttcgattatgatcttccacgt
gagcgaaaacgctctgcaaagtccccatccaacgctaagcaaaataatcgtctcatcatt
cctcctcctcctttggcaaacttggacaacgacagtgtacagaaagagatctttcgaaag
acaatagagcgatatagggcacaagacagaaaagagttgtttgaatccaataaaggagag
tcttcacgtcttcgaaaaagaagggatgaacaatccgcacagtctttaattcatgatcag
gatgtagctcaggaagagattgctgaacaaatgttgagtttgaccaagtccttgaaggag
caaactgaggcagcgaatcgaatgattcatcgggatatttccagtctggaagggactcga
cgcacagctgatgaaaacattgataaactagccgttgaaagtgatagactacaggaacat
cgaagcaccttcaattgtagatgctggatttggatacttatgtttattgtcgttatgacg
tttttaaaaatgttggtcataatgaagttatttaaaaagccaacatag
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